Evidence map›Paper›PMID 22044280›Full record

ArticlePhotochemistry and photobiology

Diversity of Chlamydomonas channelrhodopsins.

Sing-Yi Hou, Elena G Govorunova, Maria Ntefidou, C Elizabeth Lane, Elena N Spudich, Oleg A Sineshchekov, John L Spudich

Open access · greenAbstract read
In one paragraph

Article in Photochemistry and photobiology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Optogenetic engineering for ion channel modulation.Current opinion in chemical biology · 2025
    Review
  3. Sensing a rainbow of colors: algal photoreceptors.Frontiers in plant science · 2025
    Review
  4. Potassium-selective channelrhodopsins.Biophysics and physicobiology · 2023
    Article
  5. Article
  6. Review
  7. Review
  8. Structure-Function Relationship of Channelrhodopsins.Advances in experimental medicine and biology · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sing-Yi HouCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Medical School, Houston, TX, USA.
Elena G Govorunova
Maria Ntefidou
C Elizabeth Lane
Elena N Spudich
Oleg A Sineshchekov
John L Spudich
The University of Texas at Austin · US

Funding

Structure/Function of Microbial Sensory RhodopsinsR37GM027750 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SPUDICH, JOHN LEE · 2003 to 2012
$6.0M
Advanced Naturally Designed Channelrhodopsins for Photocontrol of Neural ActivityRC1AG035779 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SINESHCHEKOV, OLEG A, SPUDICH, JOHN LEE · 2009 to 2010
$900k
NIA NIH HHS RC1 AG035779NIA NIH HHS RC1AG035779NIGMS NIH HHS R37 GM027750NIGMS NIH HHS R37GM027750
6 · The paper itself

Abstract

Channelrhodopsins act as photoreceptors for control of motility behavior in flagellates and are widely used as genetically targeted tools to optically manipulate the membrane potential of specific cell populations ("optogenetics"). The first two channelrhodopsins were obtained from the model organism Chlamydomonas reinhardtii (CrChR1 and CrChR2). By homology cloning we identified three new channelrhodopsin sequences from the same genus, CaChR1, CyChR1 and CraChR2, from C. augustae, C. yellowstonensis and C. raudensis, respectively. CaChR1 and CyChR1 were functionally expressed in HEK293 cells, where they acted as light-gated ion channels similar to CrChR1. However, both, which are similar to each other, differed from CrChR1 in current kinetics, inactivation, light intensity dependence, spectral sensitivity and dependence on the external pH. These results show that extensive channelrhodopsin diversity exists even within the same genus, Chlamydomonas. The maximal spectral sensitivity of CaChR1 was at 520 nm at pH 7.4, about 40 nm redshifted as compared to that of CrChR1 under the same conditions. CaChR1 was successfully expressed in Pichia pastoris and exhibited an absorption spectrum identical to the action spectrum of CaChR1-generated photocurrents. The redshifted spectra and the lack of fast inactivation in CaChR1- and CyChR1-generated currents are features desirable for optogenetics applications.

Indexed as

Cell LineChlamydomonasHumansHydrogen-Ion ConcentrationKineticsRhodopsinRhodopsin

Identifiers

PMID22044280
PMCPMC3253254
OpenAlexW1487361437

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.