Evidence map›Paper›PMID 22041458›Full record

Trial reportPsychological medicine2012

Pharmacogenomic study of side-effects for antidepressant treatment options in STAR*D.

S L Clark, D E Adkins, K Aberg, J M Hettema, J L McClay, R P Souza, E J C G van den Oord

Open access · greenAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Psychological medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Genome-Wide Meta-Analysis of Longitudinal Alcohol Consumption Across Youth and Early Adulthood.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2015
    Pooled it
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Precision Medicine in Antidepressants Treatment.Handbook of experimental pharmacology · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

S L ClarkCenter for Biomarker Research and Personalized Medicine, Medical College of Virginia, Virginia Commonwealth University, Richmond, VA 23298-0581, USA. slclark2@vcu.edu
D E Adkins
K Aberg
J M Hettema
J L McClay
R P Souza
E J C G van den Oord
Virginia Commonwealth University · USVirginia Commonwealth University Medical Center · USUniversidade do Extremo Sul Catarinense · BR

Funding

Research Education in Statistical Genetics of Substance AbuseR25DA026119 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI NEALE, MICHAEL CHURTON · 2008 to 2018
$3.2M
Integrating Genomic and Environmental Perspectives on Internalizing DisordersK01MH093731 · NIMH · VIRGINIA COMMONWEALTH UNIVERSITY · PI ADKINS, DANIEL E · 2011 to 2015
$649k
Investigating Methylation Patterns Associated with Alcohol Use and AddictionK01AA021266 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI CLARK, SHAUNNA L · 2012 to 2016
$580k
NIAAA NIH HHS K01 AA021266NIDA NIH HHS DA026119NIDA NIH HHS R25 DA026119NIMH NIH HHS K01 MH093731
6 · The paper itself

Abstract

backgroundUnderstanding individual differences in susceptibility to antidepressant therapy side-effects is essential to optimize the treatment of depression.

methodWe performed genome-wide association studies (GWAS) to search for genetic variation affecting the susceptibility to side-effects. The analysis sample consisted of 1439 depression patients, successfully genotyped for 421K single nucleotide polymorphisms (SNPs), from the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) study. Outcomes included four indicators of side-effects: general side-effect burden, sexual side-effects, dizziness and vision/hearing-related side-effects. Our criterion for genome-wide significance was a prespecified threshold ensuring that, on average, only 10% of the significant findings are false discoveries.

resultsThirty-four SNPs satisfied this criterion. The top finding indicated that 10 SNPs in SACM1L mediated the effects of bupropion on sexual side-effects (p = 4.98 × 10(-7), q = 0.023). Suggestive findings were also found for SNPs in MAGI2, DTWD1, WDFY4 and CHL1.

conclusionsAlthough our findings require replication and functional validation, this study demonstrates the potential of GWAS to discover genes and pathways that could mediate adverse effects of antidepressant medication.

Indexed as

Antidepressive AgentsBupropionCitalopramDrug-Related Side Effects and Adverse ReactionsFactor Analysis, StatisticalGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansLinear ModelsLinkage DisequilibriumMajor Depressive DisorderMembrane ProteinsPharmacogeneticsPhenotypePhosphoric Monoester HydrolasesPolymorphism, Single NucleotideAntidepressive AgentsBupropionCitalopramMembrane ProteinsPhosphoric Monoester HydrolasesSACM1L protein, human

Identifiers

PMID22041458
PMCPMC3627503
OpenAlexW2110178687

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.