Evidence map›Paper›PMID 22033538›Full record

ArticleGene expression patterns : GEP

Identification of hunchback cis-regulatory DNA conferring temporal expression in neuroblasts and neurons.

Keiko Hirono, Jonathan S Margolis, James W Posakony, Chris Q Doe

Open access · greenAbstract read
In one paragraph

Article in Gene expression patterns : GEP. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Keiko HironoInstitutes of Neuroscience and Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene, OR 97403, USA.
Jonathan S Margolis
James W Posakony
Chris Q Doe
University of California, San Diego · USUniversity of Oregon · US

Funding

GENETIC AND MOLECULAR STUDIES OF NEUROGENESISR01HD027056 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe · 1989 to 2026
$5.0M
MOLECULAR GENETICS OF SENSORY ORGAN DEVELOPMENTR01GM046993 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI POSAKONY, JAMES W. · 1992 to 2015
$3.5M
Genetic and Molecular Studies of NeurogenesisR37HD027056 · NICHD · UNIVERSITY OF OREGON · PI DOE, CHRIS Q · 2012 to 2021
$3.0M
Howard Hughes Medical InstituteNICHD NIH HHS HD27056NICHD NIH HHS R01 HD027056NICHD NIH HHS R37 HD027056NIGMS NIH HHS GM41100NIGMS NIH HHS R01 GM046993
6 · The paper itself

Abstract

The specification of temporal identity within single progenitor lineages is essential to generate functional neuronal diversity in Drosophila and mammals. In Drosophila, four transcription factors are sequentially expressed in neural progenitors (neuroblasts) and each regulates the temporal identity of the progeny produced during its expression window. The first temporal identity is established by the Ikaros-family zinc finger transcription factor Hunchback (Hb). Hb is detected in young (newly-formed) neuroblasts for about an hour and is maintained in the early-born neurons produced during this interval. Hb is necessary and sufficient to specify early-born neuronal or glial identity in multiple neuroblast lineages. The timing of hb expression in neuroblasts is regulated at the transcriptional level. Here we identify cis-regulatory elements that confer proper hb expression in "young" neuroblasts and early-born neurons. We show that the neuroblast element contains clusters of predicted binding sites for the Seven-up transcription factor, which is known to limit hb neuroblast expression. We identify highly conserved sequences in the neuronal element that are good candidates for maintaining Hb transcription in neurons. Our results provide the necessary foundation for identifying trans-acting factors that establish the Hb early temporal expression domain.

Indexed as

Gene Expression Regulation, DevelopmentalRegulatory Elements, TranscriptionalAnimalsAnimals, Genetically ModifiedBase SequenceBinding SitesCentral Nervous SystemChromosomes, InsectDNA-Binding ProteinsDrosophilaDrosophila ProteinsGenes, ReporterMammalsMolecular Sequence DataNeuronsTime FactorsDNA-Binding ProteinsDrosophila Proteinshb protein, DrosophilaTrans-ActivatorsTranscription Factors

Identifiers

PMID22033538
PMCPMC3272097
OpenAlexW2138771990

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.