Evidence map›Paper›PMID 22032327›Full record

ArticleJournal of proteome research2012

A xenograft mouse model coupled with in-depth plasma proteome analysis facilitates identification of novel serum biomarkers for human ovarian cancer.

Hsin-Yao Tang, Lynn A Beer, Tony Chang-Wong, Rachel Hammond, Phyllis Gimotty, George Coukos, David W Speicher

Abstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 52 citations in OpenAlex.

  1. Trial
  2. Article
  3. Plasma proteome of growing tumors.Scientific reports · 2023
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  4. Review
  5. Article
  6. Article
  7. Article
  8. CLIC1 knockout inhibits invasion and migration of gastric cancer by upregulating AMOT-p130 expression.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hsin-Yao TangCenter for Systems and Computational Biology and Molecular and Cellular Oncogenesis Program, The Wistar Institute , Philadelphia, Pennsylvania, United States.
Lynn A Beer
Tony Chang-Wong
Rachel Hammond
Phyllis Gimotty
George Coukos
David W Speicher
The Wistar Institute · USUniversity of Pennsylvania · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
Identification of Ovarian Cancer Plasma BiomarkersR01CA131582 · NCI · WISTAR INSTITUTE · PI SPEICHER, DAVID W. · 2009 to 2018
$4.1M
Discovery and validation of novel serological biomarkers of colon cancerR01CA120393 · NCI · WISTAR INSTITUTE · PI SPEICHER, DAVID W. · 2006 to 2010
$1.9M
NCI NIH HHS CA010815NCI NIH HHS CA120393NCI NIH HHS CA131582NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA120393NCI NIH HHS R01 CA131582
6 · The paper itself

Abstract

Proteomics discovery of novel cancer serum biomarkers is hindered by the great complexity of serum, patient-to-patient variability, and triggering by the tumor of an acute-phase inflammatory reaction. This host response alters many serum protein levels in cancer patients, but these changes have low specificity as they can be triggered by diverse causes. We addressed these hurdles by utilizing a xenograft mouse model coupled with an in-depth 4-D protein profiling method to identify human proteins in the mouse serum. This strategy ensures that identified putative biomarkers are shed by the tumor, and detection of low-abundance proteins shed by the tumor is enhanced because the mouse blood volume is more than a thousand times smaller than that of a human. Using TOV-112D ovarian tumors, more than 200 human proteins were identified in the mouse serum, including novel candidate biomarkers and proteins previously reported to be elevated in either ovarian tumors or the blood of ovarian cancer patients. Subsequent quantitation of selected putative biomarkers in human sera using label-free multiple reaction monitoring (MRM) mass spectrometry (MS) showed that chloride intracellular channel 1, the mature form of cathepsin D, and peroxiredoxin 6 were elevated significantly in sera from ovarian carcinoma patients.

Indexed as

Amino Acid SequenceAnimalsBiomarkers, TumorBlood ProteinsCase-Control StudiesCathepsin DCell Line, TumorChloride ChannelsDisease Models, AnimalFemaleHumansMiceMolecular Sequence DataNeoplasm ProteinsOvarian NeoplasmsPeroxiredoxin VIBiomarkers, TumorBlood ProteinsCathepsin DChloride ChannelsCLIC1 protein, ratCTSD protein, humanNeoplasm ProteinsPeroxiredoxin VIPRDX6 protein, humanProteome

Identifiers

PMID22032327
PMCPMC3272104
OpenAlexW2086386755

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.