Evidence map›Paper›PMID 22031697›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus.

Matthew D Lew, Steven F Lee, Jerod L Ptacin, Marissa K Lee, Robert J Twieg, Lucy Shapiro, W E Moerner

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
16.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 146 citations in OpenAlex.

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  7. Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
  9. Article
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  13. Single-molecule localization microscopy.Nature reviews. Methods primers · 2021
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  14. Article
  15. Review
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Matthew D LewDepartment of Electrical Engineering, Stanford University, Stanford, CA 94305, USA.
Steven F Lee
Jerod L Ptacin
Marissa K Lee
Robert J Twieg
Lucy Shapiro
W E Moerner
Stanford University · USKent State University · US

Funding

REGULATION OF DIFFERENTIATION IN CAULOBACTERR01GM032506 · NIGMS · YESHIVA UNIVERSITY · PI SHAPIRO, LUCILLE · 1985 to 2014
$7.1M
Subcellular architecture of regulatory protein complexes at the bacterial poleR01GM086196 · NIGMS · STANFORD UNIVERSITY · PI MOERNER, WILLIAM E, SHAPIRO, LUCILLE · 2008 to 2015
$4.7M
Three-Dimensional Superresolution Imaging in Living Cells Using Single-Molecule AR01GM085437 · NIGMS · STANFORD UNIVERSITY · PI MOERNER, WILLIAM E · 2008 to 2015
$2.1M
Elucidating the mechanisms of chromosome segregation in C. crescentusF32GM088966 · NIGMS · STANFORD UNIVERSITY · PI PTACIN, JEROD L · 2009 to 2011
$151k
NIGMS NIH HHS F32 GM088966NIGMS NIH HHS F32GM088966-2NIGMS NIH HHS R01 GM032506NIGMS NIH HHS R01GM032506NIGMS NIH HHS R01 GM085437NIGMS NIH HHS R01GM085437NIGMS NIH HHS R01 GM086196NIGMS NIH HHS R01GM086196
6 · The paper itself

Abstract

Recently, single-molecule imaging and photocontrol have enabled superresolution optical microscopy of cellular structures beyond Abbe's diffraction limit, extending the frontier of noninvasive imaging of structures within living cells. However, live-cell superresolution imaging has been challenged by the need to image three-dimensional (3D) structures relative to their biological context, such as the cellular membrane. We have developed a technique, termed superresolution by power-dependent active intermittency and points accumulation for imaging in nanoscale topography (SPRAIPAINT) that combines imaging of intracellular enhanced YFP (eYFP) fusions (SPRAI) with stochastic localization of the cell surface (PAINT) to image two different fluorophores sequentially with only one laser. Simple light-induced blinking of eYFP and collisional flux onto the cell surface by Nile red are used to achieve single-molecule localizations, without any antibody labeling, cell membrane permeabilization, or thiol-oxygen scavenger systems required. Here we demonstrate live-cell 3D superresolution imaging of Crescentin-eYFP, a cytoskeletal fluorescent protein fusion, colocalized with the surface of the bacterium Caulobacter crescentus using a double-helix point spread function microscope. Three-dimensional colocalization of intracellular protein structures and the cell surface with superresolution optical microscopy opens the door for the analysis of protein interactions in living cells with excellent precision (20-40 nm in 3D) over a large field of view (12 12 μm).

Indexed as

AnimalsBacterial ProteinsCaulobacter crescentusCell MembraneFluorescent DyesImage Processing, Computer-AssistedImaging, Three-DimensionalLightLuminescent ProteinsMicroscopy, FluorescenceNanotechnologyOxazinesOxygenProtein ConformationProteinsBacterial ProteinsFluorescent DyesLuminescent Proteinsnile redOxazinesOxygenProteinsyellow fluorescent protein, Bacteria

Identifiers

PMID22031697
PMCPMC3219151
OpenAlexW2168964714

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.