Evidence map›Paper›PMID 22029420›Full record

ArticleEnvironmental microbiology2012

Protein glycosylation as an adaptive response in Archaea: growth at different salt concentrations leads to alterations in Haloferax volcanii S-layer glycoprotein N-glycosylation.

Ziqiang Guan, Shai Naparstek, Doron Calo, Jerry Eichler

Abstract read
In one paragraph

Article in Environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 90 citations in OpenAlex.

  1. Review
  2. Journal of bacteriology · 2025
    Review
  3. Exploring proteinmBio · 2025
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  5. Studying the long-term adaptation ofFrontiers in microbiology · 2025
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  6. Journal of bacteriology · 2024
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  15. Identification of a novelThe Journal of biological chemistry · 2020
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  20. Analysis of Cell-Cell Bridges inFrontiers in microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ziqiang GuanDepartment of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA.
Shai Naparstek
Doron Calo
Jerry Eichler
Ben-Gurion University of the Negev · ILDuke University Hospital · US

Funding

STEROL LIPIDSU54GM069338 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 2003 to 2013
$72.2M
NIGMS NIH HHS GM-069338NIGMS NIH HHS U54 GM069338
6 · The paper itself

Abstract

To cope with life in hypersaline environments, halophilic archaeal proteins are enriched in acidic amino acids. This strategy does not, however, offer a response to transient changes in salinity, as would post-translational modifications. To test this hypothesis, N-glycosylation of the Haloferax volcanii S-layer glycoprotein was compared in cells grown in high (3.4 M NaCl) and low (1.75 M NaCl) salt, as was the glycan bound to dolichol phosphate, the lipid upon which the N-linked glycan is assembled. In high salt, S-layer glycoprotein Asn-13 and Asn-83 are modified by a pentasaccharide, while dolichol phosphate is modified by a tetrasaccharide comprising the first four pentasaccharide residues. When the same targets were considered from cells grown in low salt, substantially less pentasaccharide was detected. At the same time, cells grown at low salinity contain dolichol phosphate modified by a distinct tetrasaccharide absent in cells grown at high salinity. The same tetrasaccharide modified S-layer glycoprotein Asn-498 in cells grown in low salt, whereas no glycan decorated this residue in cells grown in the high-salt medium. Thus, in response to changes in environmental salinity, Hfx. volcanii not only modulates the N-linked glycans decorating the S-layer glycoprotein but also the sites of such post-translational modification.

Indexed as

Archaeal ProteinsDolichol PhosphatesGlycoproteinsGlycosylationHaloferax volcaniiMembrane GlycoproteinsOligosaccharidesPolysaccharidesProtein Processing, Post-TranslationalSalinitySalt ToleranceSodium ChlorideArchaeal ProteinsDolichol PhosphatesGlycoproteinsMembrane GlycoproteinsOligosaccharidesPolysaccharidesS-layer proteinsSodium Chloride

Identifiers

PMID22029420
PMCPMC3414426
OpenAlexW2133605736

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.