Evidence map›Paper›PMID 22024743›Full record

ArticleAutophagy2011

Atg13 and FIP200 act independently of Ulk1 and Ulk2 in autophagy induction.

Sebastian Alers, Antje S Löffler, Florian Paasch, Alexandra M Dieterle, Hildegard Keppeler, Kirsten Lauber, David G Campbell, Birgit Fehrenbacher, Martin Schaller, Sebastian Wesselborg and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 3 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 3 syntheses or guidelines pooled it, 136 citations in OpenAlex.

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  15. Frontiers in pharmacology · 2022
    Article
  16. Autophagy coordinates chondrocyte development and early joint formation in zebrafish.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Sebastian AlersDepartment of Internal Medicine I; University Clinic of Tübingen; Tübingen, Germany.
Antje S Löffler
Florian Paasch
Alexandra M Dieterle
Hildegard Keppeler
Kirsten Lauber
David G Campbell
Birgit Fehrenbacher
Martin Schaller
Sebastian Wesselborg
Björn Stork
University of Tübingen · DELudwig-Maximilians-Universität München · DEUniversity of Dundee · GB

Funding

Medical Research Council
6 · The paper itself

Abstract

Under normal growth conditions the mammalian target of rapamycin complex 1 (mTORC1) negatively regulates the central autophagy regulator complex consisting of Unc-51-like kinases 1/2 (Ulk1/2), focal adhesion kinase family-interacting protein of 200 kDa (FIP200) and Atg13. Upon starvation, mTORC1-mediated repression of this complex is released, which then leads to Ulk1/2 activation. In this scenario, Atg13 has been proposed as an adaptor mediating the interaction between Ulk1/2 and FIP200 and enhancing Ulk1/2 kinase activity. Using Atg13-deficient cells, we demonstrate that Atg13 is indispensable for autophagy induction. We further show that Atg13 function strictly depends on FIP200 binding. In contrast, the simultaneous knockout of Ulk1 and Ulk2 did not have a similar effect on autophagy induction. Accordingly, the Ulk1-dependent phosphorylation sites we identified in Atg13 are expendable for this process. This suggests that Atg13 has an additional function independent of Ulk1/2 and that Atg13 and FIP200 act in concert during autophagy induction.

Indexed as

AutophagyAdaptor Proteins, Signal TransducingAnimalsBinding SitesCell LineChickensExonsGene Knockout TechniquesModels, BiologicalPhagosomesPhenotypeProtein BindingProtein Serine-Threonine KinasesProtein-Tyrosine KinasesSignal TransductionAdaptor Proteins, Signal TransducingProtein Serine-Threonine KinasesProtein-Tyrosine Kinases

Identifiers

PMID22024743
PMCPMC3327613
OpenAlexW1999558691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.