Evidence map›Paper›PMID 22022424›Full record

ArticlePloS one2011

The accuracy of survival time prediction for patients with glioma is improved by measuring mitotic spindle checkpoint gene expression.

Li Bie, Gang Zhao, Pui Cheng, Gaelle Rondeau, Steffen Porwollik, Yan Ju, Xiao-Qin Xia, Michael McClelland

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Research progress of Bub3 gene in malignant tumors.Cell biology international · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Seven genes for the prognostic prediction in patients with glioma.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Aneuploidy: Cancer strength or vulnerability?International journal of cancer · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Li BieDepartment of Neurosurgery of the First Clinical Hospital, Jilin University, Changchun, People's Republic of China.
Gang Zhao
Pui Cheng
Gaelle Rondeau
Steffen Porwollik
Yan Ju
Xiao-Qin Xia
Michael McClelland
Vaccine Research Institute of San Diego · USJilin University · CNUniversity of California, Irvine · US

Funding

The Prostate Cancer Tumor Microenvironment Exhibits Differentially Expressed GeneU01CA152738 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, CHUNG, MERCOLA, DAN · 2010 to 2015
$3.6M
NCI NIH HHS U01 CA152738NCI NIH HHS U01CA152738
6 · The paper itself

Abstract

Identification of gene expression changes that improve prediction of survival time across all glioma grades would be clinically useful. Four Affymetrix GeneChip datasets from the literature, containing data from 771 glioma samples representing all WHO grades and eight normal brain samples, were used in an ANOVA model to screen for transcript changes that correlated with grade. Observations were confirmed and extended using qPCR assays on RNA derived from 38 additional glioma samples and eight normal samples for which survival data were available. RNA levels of eight major mitotic spindle assembly checkpoint (SAC) genes (BUB1, BUB1B, BUB3, CENPE, MAD1L1, MAD2L1, CDC20, TTK) significantly correlated with glioma grade and six also significantly correlated with survival time. In particular, the level of BUB1B expression was highly correlated with survival time (p<0.0001), and significantly outperformed all other measured parameters, including two standards; WHO grade and MIB-1 (Ki-67) labeling index. Measurement of the expression levels of a small set of SAC genes may complement histological grade and other clinical parameters for predicting survival time.

Indexed as

Gene Expression Regulation, NeoplasticCell Cycle ProteinsCell Line, TumorDatabases, GeneticGliomaHumansKaplan-Meier EstimateModels, GeneticM Phase Cell Cycle CheckpointsMultivariate AnalysisNeoplasm GradingOligonucleotide Array Sequence AnalysisPolymerase Chain ReactionPrognosisReproducibility of ResultsStatistics, NonparametricCell Cycle Proteins

Identifiers

PMID22022424
PMCPMC3192043
OpenAlexW2038598433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.