Evidence map›Paper›PMID 22020511›Full record

ArticleApplied and environmental microbiology2012

Experimental evolution of a facultative thermophile from a mesophilic ancestor.

Ian K Blaby, Benjamin J Lyons, Ewa Wroclawska-Hughes, Grier C F Phillips, Tyler P Pyle, Stephen G Chamberlin, Steven A Benner, Thomas J Lyons, Valérie de Crécy-Lagard, Eudes de Crécy

Abstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Advances in adaptive laboratory evolution applications forSynthetic and systems biotechnology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Limited Diversity of Thermal Adaptation to a Critical Temperature inInternational journal of molecular sciences · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Genomic attributes of thermophilic and hyperthermophilic bacteria and archaea.World journal of microbiology & biotechnology · 2022
    Review
  19. Article
  20. Evolution of Protein Structure and Stability in Global Warming.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ian K BlabyEvolugate, Gainesville, Florida, USA.
Benjamin J Lyons
Ewa Wroclawska-Hughes
Grier C F Phillips
Tyler P Pyle
Stephen G Chamberlin
Steven A Benner
Thomas J Lyons
Valérie de Crécy-Lagard
Eudes de Crécy

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Experimental evolution via continuous culture is a powerful approach to the alteration of complex phenotypes, such as optimal/maximal growth temperatures. The benefit of this approach is that phenotypic selection is tied to growth rate, allowing the production of optimized strains. Herein, we demonstrate the use of a recently described long-term culture apparatus called the Evolugator for the generation of a thermophilic descendant from a mesophilic ancestor (Escherichia coli MG1655). In addition, we used whole-genome sequencing of sequentially isolated strains throughout the thermal adaptation process to characterize the evolutionary history of the resultant genotype, identifying 31 genetic alterations that may contribute to thermotolerance, although some of these mutations may be adaptive for off-target environmental parameters, such as rich medium. We undertook preliminary phenotypic analysis of mutations identified in the glpF and fabA genes. Deletion of glpF in a mesophilic wild-type background conferred significantly improved growth rates in the 43-to-48°C temperature range and altered optimal growth temperature from 37°C to 43°C. In addition, transforming our evolved thermotolerant strain (EVG1064) with a wild-type allele of glpF reduced fitness at high temperatures. On the other hand, the mutation in fabA predictably increased the degree of saturation in membrane lipids, which is a known adaptation to elevated temperature. However, transforming EVG1064 with a wild-type fabA allele had only modest effects on fitness at intermediate temperatures. The Evolugator is fully automated and demonstrates the potential to accelerate the selection for complex traits by experimental evolution and significantly decrease development time for new industrial strains.

Indexed as

Adaptation, BiologicalAquaporinsBiological EvolutionCell Culture TechniquesCell EngineeringDNA, BacterialEscherichia coli K12Escherichia coli ProteinsFatty Acid Synthase, Type IIGenetic FitnessGenome, BacterialGenotypeHydro-LyasesPhenotypeSelection, GeneticSequence Analysis, DNA3-hydroxyacyl-(acyl-carrier-protein) dehydrataseAquaporinsDNA, BacterialEscherichia coli ProteinsFatty Acid Synthase, Type IIGlpF protein, E coliHydro-Lyases

Identifiers

PMID22020511
PMCPMC3255606

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.