Evidence map›Paper›PMID 22018540›Full record

ArticleCurrent biology : CB2011

Rapid de novo centromere formation occurs independently of heterochromatin protein 1 in C. elegans embryos.

Karen W Y Yuen, Kentaro Nabeshima, Karen Oegema, Arshad Desai

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Nematode chromosomes.Genetics · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Epigenetic regulation of centromere function.Cellular and molecular life sciences : CMLS · 2020
    Review
  11. Review
  12. TheGenetics · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Analysis of Meiotic Sister Chromatid Cohesion in Caenorhabditis elegans.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Karen W Y YuenLudwig Institute for Cancer Research and Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92037, USA.
Kentaro Nabeshima
Karen Oegema
Arshad Desai
University of California San Diego · USLudwig Cancer Research · BEUniversity of Michigan · US

Funding

Kinetochore Specification and FunctionR01GM074215 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DESAI, ARSHAD · 2005 to 2025
$8.2M
NIGMS NIH HHS GM074215NIGMS NIH HHS R01 GM074215
6 · The paper itself

Abstract

DNA injected into the Caenorhabditis elegans germline forms extrachromosomal arrays that segregate during cell division [1, 2]. The mechanisms underlying array formation and segregation are not known. Here, we show that extrachromosomal arrays form de novo centromeres at high frequency, providing unique access to a process that occurs with extremely low frequency in other systems [3-8]. De novo centromerized arrays recruit centromeric chromatin and kinetochore proteins and autonomously segregate on the spindle. Live imaging following DNA injection revealed that arrays form after oocyte fertilization via homologous recombination and nonhomologous end-joining. Individual arrays gradually transition from passive inheritance to active segregation during the early embryonic divisions. The heterochromatin protein 1 (HP1) family proteins HPL-1 and HPL-2 are dispensable for de novo centromerization even though arrays become strongly enriched for the heterochromatin-associated H3K9me3 modification over time. Partial inhibition of HP1 family proteins accelerates the acquisition of segregation competence. In addition to reporting the first direct visualization of new centromere formation in living cells, these findings reveal that naked DNA rapidly builds de novo centromeres in C. elegans embryos in an HP1-independent manner and suggest that, rather than being a prerequisite, HP1-dependent heterochromatin antagonizes de novo centromerization.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCentromereChromosomal Proteins, Non-HistoneDNA, HelminthHomologous RecombinationKinetochoresCaenorhabditis elegans ProteinsChromosomal Proteins, Non-HistoneDNA, HelminthHPL-1 protein, C elegansHPL-2 protein, C elegans

Identifiers

PMID22018540
PMCPMC3249440
OpenAlexW1972621995

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.