Evidence map›Paper›PMID 22016683›Full record

ArticleThe Korean journal of laboratory medicine2011

Comparison of an automated repetitive sequence-based PCR microbial typing system with IS6110-restriction fragment length polymorphism for epidemiologic investigation of clinical Mycobacterium tuberculosis isolates in Korea.

Mi Hee Jang, Go Eun Choi, Bo-Moon Shin, Seon Ho Lee, Sung-Ryul Kim, Chulhun L Chang, Jeong-Man Kim

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in The Korean journal of laboratory medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mi Hee JangDepartment of Laboratory Medicine, School of Medicine, Pusan National University, Yangsan, Korea.
Go Eun Choi
Bo-Moon Shin
Seon Ho Lee
Sung-Ryul Kim
Chulhun L Chang
Jeong-Man Kim

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberculosis remains a severe public health problem worldwide. Presently, genotyping is used for conducting epidemiologic and clinical studies on tuberculosis cases. We evaluated the efficacy of the repetitive sequence-based PCR (rep-PCR)-based DiversiLab™ system (bioMérieux, France) over the IS6110-restriction fragment length polymorphism analysis for detecting Mycobacterium tuberculosis. In all, 89 clinical M. tuberculosis isolates collected nationwide from Korea were used. The DiversiLab system allocated the 89 isolates to 8 groups with 1 unique isolate when a similarity level of 95% was applied. Seventy-six isolates of the Beijing family and 13 isolates of non-Beijing family strains were irregularly distributed regardless of rep-PCR groups. The DiversiLab system generated a rapid, sensitive, and standardized result. It can be used to conduct molecular epidemiologic studies to identify clinical M. tuberculosis isolates in Korea.

Indexed as

Bacterial Typing TechniquesEpidemiologic MethodsPolymerase Chain ReactionAutomationGenotypeHumansMycobacterium tuberculosisPolymorphism, Restriction Fragment LengthReagent Kits, DiagnosticRepetitive Sequences, Nucleic AcidRepublic of KoreaTuberculosisReagent Kits, DiagnosticDiversiLab Microbial Typing SystemMycobacterium tuberculosisRepetitive sequence-based polymerase chain reaction

Identifiers

PMID22016683
PMCPMC3190008

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.