Evidence map›Paper›PMID 22014167›Full record

ArticleMolecular microbiology2011

Fructose-1,6-bisphosphate aldolase (class II) is the primary site of nickel toxicity in Escherichia coli.

Lee Macomber, Scott P Elsey, Robert P Hausinger

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Assignment of the antibacterial potential of AgBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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  5. Conversion ofMicroorganisms · 2023
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  6. Soft-metal(loid)s induce protein aggregation inFrontiers in microbiology · 2023
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  7. Review
  8. Article
  9. Article
  10. Protein metalation in biology.Current opinion in chemical biology · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Metalloproteins in the Biology of Heterocysts.Life (Basel, Switzerland) · 2019
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lee MacomberDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824-4320, USA.
Scott P Elsey
Robert P Hausinger
Michigan State University · US

Funding

MECHANISM OF UREASE METALLOCENTER BIOSYNTHESISR01DK045686 · NIDDK · MICHIGAN STATE UNIVERSITY · PI HAUSINGER, ROBERT P · 1994 to 2010
$2.1M
NIDDK NIH HHS DK045686NIDDK NIH HHS R01 DK045686
6 · The paper itself

Abstract

Nickel is toxic to all forms of life, but the mechanisms of cell damage are unknown. Indeed, environmentally relevant nickel levels (8 µM) inhibit wild-type Escherichia coli growth on glucose minimal medium. The same concentration of nickel also inhibits growth on fructose, but not succinate, lactate or glycerol; these results suggest that fructose-1,6-bisphosphate aldolase (FbaA) is a target of nickel toxicity. Cells stressed by 8 µM Ni(II) for 20 min lost 75% of their FbaA activity, demonstrating that FbaA is inactivated during nickel stress. Furthermore, overexpression of fbaA restored growth of an rcnA mutant in glucose minimal medium supplemented with 4 µM Ni(II), thus confirming that FbaA is a primary target of nickel toxicity. This class II aldolase has an active site zinc and a non-catalytic zinc nearby. Purified FbaA lost 80 % of its activity within 2 min when challenged with 8 µM Ni(II). Nickel-challenged FbaA lost 0.8 zinc and gained 0.8 nickel per inactivated monomer. FbaA mutants (D144A and E174A) affecting the non-catalytic zinc were resistant to nickel inhibition. These results define the primary site of nickel toxicity in E. coli as the class II aldolase FbaA through binding to the non-catalytic zinc site.

Indexed as

Carbohydrate MetabolismCulture MediaEnzyme InhibitorsEscherichia coliFructose-Bisphosphate AldolaseKineticsMutant ProteinsNickelCulture MediaEnzyme InhibitorsFructose-Bisphosphate AldolaseMutant ProteinsNickel

Identifiers

PMID22014167
PMCPMC3225726
OpenAlexW1616066464

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.