Evidence map›Paper›PMID 22013879›Full record

ArticleBiochemistry2011

Crystal structure and characterization of particulate methane monooxygenase from Methylocystis species strain M.

Stephen M Smith, Swati Rawat, Joshua Telser, Brian M Hoffman, Timothy L Stemmler, Amy C Rosenzweig

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 154 citations in OpenAlex.

  1. Article
  2. HChemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  3. Review
  4. Regulatory mechanisms of CHFrontiers in microbiology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Structures of methane and ammonia monooxygenases in native membranes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. mSystems · 2022
    Article
  18. Review
  19. Article
  20. Microbial oxidation of atmospheric trace gases.Nature reviews. Microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stephen M SmithDepartments of Molecular Biosciences and of Chemistry, Northwestern University, Evanston, Illinois 60208, United States.
Swati Rawat
Joshua Telser
Brian M Hoffman
Timothy L Stemmler
Amy C Rosenzweig
Northwestern University · USWayne State University · US

Funding

COBOGLOBINS: COBALT-SUBSTITUTED MYO- AND HEMOGLOBINSR01HL013531 · NHLBI · NORTHWESTERN UNIVERSITY · PI HOFFMAN, BRIAN M · 1985 to 2013
$7.7M
Particulate Methane MonooxygenaseR01GM070473 · NIGMS · NORTHWESTERN UNIVERSITY · PI ROSENZWEIG, AMY C. · 2004 to 2015
$3.7M
Structural Insights into the Function of FrataxinR01DK068139 · NIDDK · WAYNE STATE UNIVERSITY · PI STEMMLER, TIMOTHY LOUIS · 2005 to 2015
$3.5M
COBOGLOBINS: COBALT-SUBSTITUTED MYO- AND HEMOGLOBINSR37HL013531 · NHLBI · NORTHWESTERN UNIVERSITY · PI HOFFMAN, BRIAN M · 1989 to 1998
–
NCI NIH HHS Y1-CO-1020NHLBI NIH HHS HL13531NHLBI NIH HHS R01 HL013531NIDDK NIH HHS DK068139NIDDK NIH HHS R01 DK068139NIGMS NIH HHS GM70473NIGMS NIH HHS R01 GM070473NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

Particulate methane monooxygenase (pMMO) is an integral membrane metalloenzyme that oxidizes methane to methanol in methanotrophic bacteria. Previous biochemical and structural studies of pMMO have focused on preparations from Methylococcus capsulatus (Bath) and Methylosinus trichosporium OB3b. A pMMO from a third organism, Methylocystis species strain M, has been isolated and characterized. Both membrane-bound and solubilized Methylocystis sp. strain M pMMO contain ~2 copper ions per 100 kDa protomer and exhibit copper-dependent propylene epoxidation activity. Spectroscopic data indicate that Methylocystis sp. strain M pMMO contains a mixture of Cu(I) and Cu(II), of which the latter exhibits two distinct type 2 Cu(II) electron paramagnetic resonance (EPR) signals. Extended X-ray absorption fine structure (EXAFS) data are best fit with a mixture of Cu-O/N and Cu-Cu ligand environments with a Cu-Cu interaction at 2.52-2.64 Å. The crystal structure of Methylocystis sp. strain M pMMO was determined to 2.68 Å resolution and is the best quality pMMO structure obtained to date. It provides a revised model for the pmoA and pmoC subunits and has led to an improved model of M. capsulatus (Bath) pMMO. In these new structures, the intramembrane zinc/copper binding site has a different coordination environment from that in previous models.

Indexed as

Bacterial ProteinsBinding SitesCopperCrystallography, X-RayElectron Spin Resonance SpectroscopyMethylocystaceaeModels, MolecularOxygenasesProtein BindingBacterial ProteinsCoppermethane monooxygenaseOxygenases

Identifiers

PMID22013879
PMCPMC3364217
OpenAlexW2088126034

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.