Evidence map›Paper›PMID 22012654›Full record

ReviewWiley interdisciplinary reviews. Systems biology and medicine

Systems vaccinology: learning to compute the behavior of vaccine induced immunity.

Helder I Nakaya, Shuzhao Li, Bali Pulendran

Registry-linked trialAbstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. Systems biology and medicine. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02765126 (Clifford Craig Vaccine Trial Centre), which is not on this map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02765126 naunknown statusnot on this map

Clifford Craig Vaccine Trial Centre: Heterologous Effect of Diptheria, Tetanus, Acellular Pertussis Vaccination on Influenza Vaccine Challenge in the Elderly

TypeinterventionalSponsorClifford Craig Medical Research TrustRan2016 to 2019Enrolled450ConditionsHeterologous Effects of VaccinesArmsSeasonal influenza vaccine, Diphtheria-tetanus-acellular pertussis vaccine
3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Helder I NakayaEmory Vaccine Center, Yerkes National Primate Research Center, Atlanta, GA, USA.
Shuzhao Li
Bali Pulendran

Funding

Systems Biological Analysis of Innate and Adaptive Responses to VaccinationU19AI090023 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI, LI, SHUZHAO · 2010 to 2021
$45.0M
Understanding the Role of Mucosal Antigen Presenting Cells in Regulating Immune ResponseR37AI048638 · NIAID · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2009 to 2018
$4.0M
Polarizing T Cell Responses in vivo With Dendritic CellsR37DK057665 · NIDDK · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2010 to 2019
$3.9M
Emory R38 Research Training ProgramR38AI140299 · NIAID · EMORY UNIVERSITY · PI OFOTOKUN, IGHOVWERHA, ROUPHAEL, NADINE GEORGES · 2018 to 2021
$1.4M
Microbes, Dendritic Cell Subsets and T-Cell ImmunityR56AI048638 · NIAID · EMORY UNIVERSITY · PI PULENDRAN, BALI · 2008 to 2008
$440k
NIAID NIH HHS R37 AI048638NIAID NIH HHS R38 AI140299NIAID NIH HHS R56 AI048638NIAID NIH HHS U19 AI090023NIDDK NIH HHS R37 DK057665
6 · The paper itself

Abstract

The goal of systems biology is to access and integrate information about the parts (e.g., genes, proteins, cells) of a biological system with a view to computing and predicting the behavior of the system. The past decade has witnessed technological revolutions in the capacity to make high throughput measurements about the behavior of genes, proteins, and cells. Such technologies are widely used in biological research and in medicine, such as toward prognosis and therapy response prediction in cancer patients. More recently, systems biology is being applied to vaccinology, with the goal of: (1) understanding the mechanisms by which vaccines stimulate protective immunity, and (2) predicting the immunogenicity or efficacy of vaccines. Here, we review the recent advances in this area, and highlight the biological and computational challenges posed.

Indexed as

Systems BiologyAntibodiesCD8-Positive T-LymphocytesHumansOligonucleotide Array Sequence AnalysisProtein Interaction MapsProteinsTranscriptomeVaccinesYellow Fever VaccineAntibodiesProteinsVaccinesYellow Fever Vaccine

Identifiers

PMID22012654
PMCPMC3288517

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.