Evidence map›Paper›PMID 22011470›Full record

ArticleActa crystallographica. Section A, Foundations of crystallography2011

A multi-dataset data-collection strategy produces better diffraction data.

Zhi Jie Liu, Lirong Chen, Dong Wu, Wei Ding, Hua Zhang, Weihong Zhou, Zheng Qing Fu, Bi Cheng Wang

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section A, Foundations of crystallography, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Long-wavelength Mesh&Collect native SAD phasing from microcrystals.Acta crystallographica. Section D, Structural biology · 2019
    Article
  5. Contemporary Use of Anomalous Diffraction in Biomolecular Structure Analysis.Methods in molecular biology (Clifton, N.J.) · 2017
    Review
  6. EIGER detector: application in macromolecular crystallography.Acta crystallographica. Section D, Structural biology · 2016
    Article
  7. Article
  8. Can I solve my structure by SAD phasing? Anomalous signal in SAD phasing.Acta crystallographica. Section D, Structural biology · 2016
    Article
  9. Review
  10. Review
  11. Towards time-resolved serial crystallography in a microfluidic device.Acta crystallographica. Section F, Structural biology communications · 2015
    Article
  12. Article
  13. Journal of applied crystallography · 2014
    Article
  14. Article
  15. Article
  16. Squeezing the most from every crystal: the fine details of data collection.Acta crystallographica. Section D, Biological crystallography · 2013
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Zhi Jie LiuNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, People's Republic of China. zjliu@ibp.ac.cn
Lirong Chen
Dong Wu
Wei Ding
Hua Zhang
Weihong Zhou
Zheng Qing Fu
Bi Cheng Wang
University of Georgia · USChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A multi-dataset (MDS) data-collection strategy is proposed and analyzed for macromolecular crystal diffraction data acquisition. The theoretical analysis indicated that the MDS strategy can reduce the standard deviation (background noise) of diffraction data compared with the commonly used single-dataset strategy for a fixed X-ray dose. In order to validate the hypothesis experimentally, a data-quality evaluation process, termed a readiness test of the X-ray data-collection system, was developed. The anomalous signals of sulfur atoms in zinc-free insulin crystals were used as the probe to differentiate the quality of data collected using different data-collection strategies. The data-collection results using home-laboratory-based rotating-anode X-ray and synchrotron X-ray systems indicate that the diffraction data collected with the MDS strategy contain more accurate anomalous signals from sulfur atoms than the data collected with a regular data-collection strategy. In addition, the MDS strategy offered more advantages with respect to radiation-damage-sensitive crystals and better usage of rotating-anode as well as synchrotron X-rays.

Indexed as

AnimalsCattleCrystallography, X-RayInsulinModels, MolecularSulfurSynchrotronsX-RaysInsulinSulfur

Identifiers

PMID22011470
PMCPMC3211246
OpenAlexW2077820963

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.