Evidence map›Paper›PMID 22009263›Full record

ArticleExtremophiles : life under extreme conditions2012

The CphAII protein from Aquifex aeolicus exhibits a metal-dependent phosphodiesterase activity.

Michaël Kupper, Cédric Bauvois, Jean-Marie Frère, Kurt Hoffmann, Moreno Galleni, Carine Bebrone

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Article in Extremophiles : life under extreme conditions, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Michaël KupperInstitute of Molecular Biotechnology, RWTH-Aachen University, Forckenbeckstraße 6, Aachen, Germany.
Cédric Bauvois
Jean-Marie Frère
Kurt Hoffmann
Moreno Galleni
Carine Bebrone
RWTH Aachen University · DEUniversity of Liège · BECentre d'Enseignement et de Recherches des Industries Alimentaires et Chimiques · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CphAII protein from the hyperthermophile Aquifex aeolicus shows the five conserved motifs of the metallo-β-lactamase (MBL) superfamily and presents 28% identity with the Aeromonas hydrophila subclass B2 CphA MBL. The gene encoding CphAII was amplified by PCR from the A. aeolicus genomic DNA and overexpressed in Escherichia coli using a pLex-based expression system. The recombinant CphAII protein was purified by a combination of heating (to denature E. coli proteins) and two steps of immobilized metal affinity chromatography. The purified enzyme preparation did not exhibit a β-lactamase activity but showed a metal-dependent phosphodiesterase activity versus bis-p-nitrophenyl phosphate and thymidine 5'-monophosphate p-nitrophenyl ester, with an optimum at 85°C. The circular dichroism spectrum was in agreement with the percentage of secondary structures characteristic of the MBL αββα fold.

Indexed as

Amino Acid SequenceBacteriaBacterial ProteinsBase SequenceChromatography, AffinityCircular DichroismDNA, BacterialDNA PrimersElectrophoresis, Polyacrylamide GelKineticsMass SpectrometryMetalsMolecular Sequence DataPhosphoric Diester HydrolasesPolymerase Chain ReactionRecombinant ProteinsBacterial ProteinsDNA, BacterialDNA PrimersMetalsPhosphoric Diester HydrolasesRecombinant Proteins

Identifiers

PMID22009263
OpenAlexW2095260408

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.