Evidence map›Paper›PMID 22006793›Full record

ArticleHuman mutation2012

Functional characterization and targeted correction of ATM mutations identified in Japanese patients with ataxia-telangiectasia.

Kotoka Nakamura, Liutao Du, Rashmi Tunuguntla, Francesca Fike, Simona Cavalieri, Tomohiro Morio, Shuki Mizutani, Alfredo Brusco, Richard A Gatti

Open access · bronzeAbstract read
In one paragraph

Article in Human mutation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Review
  7. Dbp5/DDX19 between Translational Readthrough and Nonsense Mediated Decay.International journal of molecular sciences · 2020
    Review
  8. Absence of p.R50XDisease models & mechanisms · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Analysis of ComplementFrontiers in immunology · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Kotoka NakamuraDepartment of Pathology and Laboratory Medicine, UCLA School of Medicine, Los Angeles, California 90095-1732, USA.
Liutao Du
Rashmi Tunuguntla
Francesca Fike
Simona Cavalieri
Tomohiro Morio
Shuki Mizutani
Alfredo Brusco
Richard A Gatti
University of California, Los Angeles · USTokyo Medical and Dental University · JP

Funding

DRUG-INDUCED ATM READTHROUGH OF PTC MUTATIONSR01NS052528 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GATTI, RICHARD A · 2007 to 2011
$1.8M
NINDS NIH HHS 1R01NS052528NINDS NIH HHS R01 NS052528
6 · The paper itself

Abstract

A recent challenge for investigators studying the progressive neurological disease ataxia-telangiectasia (A-T) is to identify mutations whose effects might be alleviated by mutation-targeted therapies. We studied ATM mutations in eight families of Japanese A-T patients (JPAT) and were able to identify all 16 mutations. The probands were compound heterozygotes in seven families, and one (JPAT2) was homozygous for a frameshift mutation. All mutations--four frameshift, two nonsense, four large genomic deletions, and six affecting splicing--were novel except for c.748C>T found in family JPAT6 and c.2639-384A>G found in family JPAT11/12. Using an established lymphoblastoid cell line (LCL) of patient JPAT11, ATM protein was restored to levels approaching wild type by exposure to an antisense morpholino oligonucleotide designed to correct a pseudoexon splicing mutation. In addition, in an LCL from patient JPAT8/9, a heterozygous carrier of a nonsense mutation, ATM levels could also be partially restored by exposure to readthrough compounds (RTCs): an aminoglycoside, G418, and a novel small molecule identified in our laboratory, RTC13. Taken together, our results suggest that screening and functional characterization of the various sorts of mutations affecting the ATM gene can lead to better identification of A-T patients who are most likely to benefit from rapidly developing mutation-targeted therapeutic technologies.

Indexed as

Codon, NonsenseFrameshift MutationSequence DeletionAminoglycosidesAsian PeopleAtaxia TelangiectasiaAtaxia Telangiectasia Mutated ProteinsBase SequenceCell Cycle ProteinsCell LineDNA-Binding ProteinsDNA Mutational AnalysisExonsGentamicinsHeterozygoteHumansAminoglycosidesantibiotic G 418Ataxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsCodon, NonsenseDNA-Binding ProteinsGentamicinsMorpholinosOligodeoxyribonucleotides, AntisenseProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID22006793
PMCPMC3261637
OpenAlexW2061775019

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.