Evidence map›Paper›PMID 22006338›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Loss-of-function mutations in Notch receptors in cutaneous and lung squamous cell carcinoma.

Nicholas J Wang, Zachary Sanborn, Kelly L Arnett, Laura J Bayston, Wilson Liao, Charlotte M Proby, Irene M Leigh, Eric A Collisson, Patricia B Gordon, Lakshmi Jakkula and 23 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 267 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
267citing papers in PubMed, 2 pooled it
43.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

267 citing papers in PubMed, 2 syntheses or guidelines pooled it, 466 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2025
    Trial
  4. Trial
  5. Trial
  6. NOTCH pathway inactivation promotes bladder cancer progression.The Journal of clinical investigation · 2015
    Trial
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. SMURF2 in Anticancer Therapy: Dual Role in Carcinogenesis and Theranostics.International journal of molecular sciences · 2026
    Review
  18. Review
  19. Article
  20. Article

207 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 9 institutions in 3 countries.

Nicholas J WangLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Zachary Sanborn
Kelly L Arnett
Laura J Bayston
Wilson Liao
Charlotte M Proby
Irene M Leigh
Eric A Collisson
Patricia B Gordon
Lakshmi Jakkula
Sally Pennypacker
Yong Zou
Mimansa Sharma
Jeffrey P North
Swapna S Vemula
Theodora M Mauro
Isaac M Neuhaus
Philip E Leboit
Joe S Hur
Kyunghee Park
Nam Huh
Pui-Yan Kwok
Sarah T Arron
Pierre P Massion
Allen E Bale
David Haussler
James E Cleaver
Joe W Gray
Paul T Spellman
Andrew P South
Jon C Aster
Stephen C Blacklow
Raymond J Cho
University of California, San Francisco · USBrigham and Women's Hospital · USNinewells Hospital · GBSamsung (South Korea) · KRLawrence Berkeley National Laboratory · USOregon Health & Science University · USUniversity of California, Santa Cruz · USVanderbilt University · USYale University · US

Funding

Yale SPORE in Skin CancerP50CA121974 · NCI · YALE UNIVERSITY · PI DAVID F STERN · 2006 to 2026
$43.9M
Tissue and Outcomes CoreP50CA058207 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRAY, JOE W. · 1992 to 2012
$32.7M
Systems-Based Predictions of Responses to Cancer TherapyU54CA112970 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI GRAY, JOE W. · 2004 to 2014
$27.1M
Protein CoreP01CA119070 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI LIU, XIAOLE SHIRLEY · 2006 to 2016
$10.3M
The Berkeley Cancer Genome CenterU24CA126551 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI GRAY, JOE W. · 2006 to 2009
$5.4M
Structure and Function in Notch SignalingR01CA092433 · NCI · HARVARD MEDICAL SCHOOL · PI BLACKLOW, STEPHEN C. · 2002 to 2016
$5.0M
TCGA Data Analysis Center at BerkeleyU24CA143799 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SPEED, TERENCE PAUL, SPELLMAN, PAUL T. · 2009 to 2016
$4.9M
ATP2A2-Regulated Keretinocyted Ca2+ Signaling MechanismsR01AR051930 · NIAMS · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI MAURO, THEODORA M · 2006 to 2019
$3.2M
Aging Stratum Corneum pH and Barrier FunctionR01AG028492 · NIA · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI MAURO, THEODORA M · 2008 to 2012
$1.5M
A Model for Preclinical Biomarker Discovery in Pancreatic Ductal AdenocarcinomaK08CA137153 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC · 2010 to 2014
$815k
Genetic Analysis of the TNF Pathway in PsoriasisK08AR057763 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIAO, WILSON · 2010 to 2014
$599k
Integrated analysis of Notch pathway loss-of-function in epithelial tumorigenesisK08CA169865 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHO, RAYMOND JAIHYUN · 2012 to 2015
$504k
Cancer Research UK 13044NCI NIH HHS K08 CA137153NCI NIH HHS K08 CA169865NCI NIH HHS KO8CA137153NCI NIH HHS P01 CA119070NCI NIH HHS P50 CA058207NCI NIH HHS P50 CA121974NCI NIH HHS P50 CA 58207NCI NIH HHS R01 CA092433NCI NIH HHS U24 CA126551NCI NIH HHS U24 CA143799NCI NIH HHS U24 CA1437991NCI NIH HHS U54 CA 112970NCI NIH HHS U54 CA112970NIAMS NIH HHS 5KO8AR057763NIAMS NIH HHS AR051930NIAMS NIH HHS K08 AR057763NIAMS NIH HHS R01 AR051930NIA NIH HHS R01 AG028492NIA NIH HHS R01AG028492
6 · The paper itself

Abstract

Squamous cell carcinomas (SCCs) are one of the most frequent forms of human malignancy, but, other than TP53 mutations, few causative somatic aberrations have been identified. We identified NOTCH1 or NOTCH2 mutations in ~75% of cutaneous SCCs and in a lesser fraction of lung SCCs, defining a spectrum for the most prevalent tumor suppressor specific to these epithelial malignancies. Notch receptors normally transduce signals in response to ligands on neighboring cells, regulating metazoan lineage selection and developmental patterning. Our findings therefore illustrate a central role for disruption of microenvironmental communication in cancer progression. NOTCH aberrations include frameshift and nonsense mutations leading to receptor truncations as well as point substitutions in key functional domains that abrogate signaling in cell-based assays. Oncogenic gain-of-function mutations in NOTCH1 commonly occur in human T-cell lymphoblastic leukemia/lymphoma and B-cell chronic lymphocytic leukemia. The bifunctional role of Notch in human cancer thus emphasizes the context dependency of signaling outcomes and suggests that targeted inhibition of the Notch pathway may induce squamous epithelial malignancies.

Indexed as

Base SequenceCarcinoma, Squamous CellCell CommunicationCodon, NonsenseElectrophoretic Mobility Shift AssayHumansLod ScoreLung NeoplasmsMolecular Sequence DataReceptor, Notch1Receptor, Notch2Sequence Analysis, DNASignal TransductionSkin NeoplasmsCodon, NonsenseNOTCH1 protein, humanNOTCH2 protein, humanReceptor, Notch1Receptor, Notch2

Identifiers

PMID22006338
PMCPMC3203814
OpenAlexW2102767758

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.