Evidence map›Paper›PMID 22003129›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Subtype and pathway specific responses to anticancer compounds in breast cancer.

Laura M Heiser, Anguraj Sadanandam, Wen-Lin Kuo, Stephen C Benz, Theodore C Goldstein, Sam Ng, William J Gibb, Nicholas J Wang, Safiyyah Ziyad, Frances Tong and 33 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 314 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
314citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

314 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Harnessing the Role ofInternational journal of molecular sciences · 2025
    Article
  20. Article

254 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

43 authors.

Laura M HeiserLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Anguraj Sadanandam
Wen-Lin Kuo
Stephen C Benz
Theodore C Goldstein
Sam Ng
William J Gibb
Nicholas J Wang
Safiyyah Ziyad
Frances Tong
Nora Bayani
Zhi Hu
Jessica I Billig
Andrea Dueregger
Sophia Lewis
Lakshmi Jakkula
James E Korkola
Steffen Durinck
François Pepin
Yinghui Guan
Elizabeth Purdom
Pierre Neuvial
Henrik Bengtsson
Kenneth W Wood
Peter G Smith
Lyubomir T Vassilev
Bryan T Hennessy
Joel Greshock
Kurtis E Bachman
Mary Ann Hardwicke
John W Park
Laurence J Marton
Denise M Wolf
Eric A Collisson
Richard M Neve
Gordon B Mills
Terence P Speed
Heidi S Feiler
Richard F Wooster
David Haussler
Joshua M Stuart
Joe W Gray
Paul T Spellman

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Tissue and Outcomes CoreP50CA058207 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRAY, JOE W. · 1992 to 2012
$32.7M
Targeting the PI3K Signaling Pathway in Endometrial CarcinomaP50CA098258 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BROADDUS, RUSSELL R · 2003 to 2020
$32.0M
Systems-Based Predictions of Responses to Cancer TherapyU54CA112970 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SPELLMAN, PAUL T. · 2004 to 2014
$27.1M
The Berkeley Cancer Genome CenterU24CA126551 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI GRAY, JOE W. · 2006 to 2009
$5.4M
A Model for Preclinical Biomarker Discovery in Pancreatic Ductal AdenocarcinomaK08CA137153 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLISSON, ERIC · 2010 to 2014
$815k
Howard Hughes Medical InstituteNCI NIH HHS BC087768NCI NIH HHS K08 CA137153NCI NIH HHS K08CA137153NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA058207NCI NIH HHS P50 CA098258NCI NIH HHS U24 CA126551NCI NIH HHS U54 CA112970
6 · The paper itself

Abstract

Breast cancers are comprised of molecularly distinct subtypes that may respond differently to pathway-targeted therapies now under development. Collections of breast cancer cell lines mirror many of the molecular subtypes and pathways found in tumors, suggesting that treatment of cell lines with candidate therapeutic compounds can guide identification of associations between molecular subtypes, pathways, and drug response. In a test of 77 therapeutic compounds, nearly all drugs showed differential responses across these cell lines, and approximately one third showed subtype-, pathway-, and/or genomic aberration-specific responses. These observations suggest mechanisms of response and resistance and may inform efforts to develop molecular assays that predict clinical response.

Indexed as

Antineoplastic AgentsBreast NeoplasmsCell Line, TumorDrug Screening Assays, AntitumorFemaleGene DosageHumansModels, BiologicalSignal TransductionTranscription, GeneticAntineoplastic Agents

Identifiers

PMID22003129
PMCPMC3286973

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.