Evidence map›Paper›PMID 22002064›Full record

ArticleThe Journal of biological chemistry2011

Affinity maturation to improve human monoclonal antibody neutralization potency and breadth against hepatitis C virus.

Yong Wang, Zhen-Yong Keck, Anasuya Saha, Jinming Xia, Fraser Conrad, Jianlong Lou, Michael Eckart, James D Marks, Steven K H Foung

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  6. Design of a native-like secreted form of the hepatitis C virus E1E2 heterodimer.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. Article
  9. Article
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  11. Article
  12. Review
  13. Global mapping of antibody recognition of the hepatitis C virus E2 glycoprotein: Implications for vaccine design.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Multiantibody strategies for HIV.Clinical & developmental immunology · 2013
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yong WangDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305.
Zhen-Yong KeckDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305.
Anasuya SahaDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305.
Jinming XiaDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305.
Fraser ConradDepartment of Anesthesia, University of California, San Francisco, California 94110.
Jianlong LouDepartment of Anesthesia, University of California, San Francisco, California 94110.
Michael EckartProtein and Nucleic Acid Facility, Stanford University School of Medicine, Stanford, California 94305.
James D MarksDepartment of Anesthesia, University of California, San Francisco, California 94110.
Steven K H FoungDepartment of Pathology, Stanford University School of Medicine, Stanford, California 94305. Electronic address: sfoung@stanford.edu.
Stanford University · USUniversity of California, San Francisco · US

Funding

Neutralizing Antibodies to Hepatitis CR01HL079381 · NHLBI · STANFORD UNIVERSITY · PI FOUNG, STEVEN · 2004 to 2008
$2.8M
B Cell Immunity to Hepatitis C VirusR56AI081903 · NIAID · STANFORD UNIVERSITY · PI FOUNG, STEVEN · 2009 to 2009
$406k
NHLBI NIH HHS HL079381NHLBI NIH HHS R01 HL079381NIAID NIH HHS AI081903NIAID NIH HHS R56 AI081903
6 · The paper itself

Abstract

A potent neutralizing antibody to a conserved hepatitis C virus (HCV) epitope might overcome its extreme variability, allowing immunotherapy. The human monoclonal antibody HC-1 recognizes a conformational epitope on the HCV E2 glycoprotein. Previous studies showed that HC-1 neutralizes most HCV genotypes but has modest potency. To improve neutralization, we affinity-matured HC-1 by constructing a library of yeast-displayed HC-1 single chain Fv (scFv) mutants, using for selection an E2 antigen from one of the poorly neutralized HCVpp. We developed an approach by parallel mutagenesis of the heavy chain variable (VH) and κ-chain variable (Vk) genes separately, then combining the optimized VH and Vk mutants. This resulted in the generation of HC-1-related scFv variants exhibiting improved affinities. The best scFv variant had a 92-fold improved affinity. After conversion to IgG1, some of the antibodies exhibited a 30-fold improvement in neutralization activity. Both surface plasmon resonance and solution kinetic exclusion analysis showed that the increase in affinity was largely due to a lowering of the dissociation rate constant, Koff. Neutralization against a panel of HCV pseudoparticles and infectious 2a HCV virus improved with the affinity-matured IgG1 antibodies. Interestingly, some of these antibodies neutralized a viral isolate that was not neutralized by wild-type HC-1. Moreover, propagating 2a HCVcc under the selective pressure of WT HC-1 or affinity-matured HC-1 antibodies yielded no viral escape mutants and, with the affinity-matured IgG1, needed 100-fold less antibody to achieve complete virus elimination. Taken together, these findings suggest that affinity-matured HC-1 antibodies are excellent candidates for therapeutic development.

Indexed as

AntibodiesAntibodies, MonoclonalAntibody AffinityCell SeparationEpitopesHEK293 CellsHepacivirusHumansImmunoglobulin FragmentsImmunoglobulin GImmunotherapyKineticsMicroscopy, FluorescenceMutationNeutralization TestsAntibodiesAntibodies, MonoclonalEpitopesImmunoglobulin FragmentsImmunoglobulin G

Identifiers

PMID22002064
PMCPMC3243554
OpenAlexW2106432019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.