Evidence map›Paper›PMID 22000492›Full record

ArticleBlood cells, molecules & diseases2012

A search for β thalassemia mutations in 4000 year old ancient DNAs of Minoan Cretans.

Jeffery R Hughey, Meijun Du, Qiliang Li, Manolis Michalodimitrakis, George Stamatoyannopoulos

Open access · greenAbstract read
In one paragraph

Article in Blood cells, molecules & diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jeffery R HugheyUniversity of Washington, Department of Medicine, 1705 NE Pacific St., K-240 Health Sciences Building, Box 357720, Seattle, WA 98195-7720, USA.
Meijun Du
Qiliang Li
Manolis Michalodimitrakis
George Stamatoyannopoulos
University of Washington · USUniversity of Crete · GR

Funding

Medical Genetics Training GrantT32GM007454 · NIGMS · UNIVERSITY OF WASHINGTON · PI Gail Pairitz Jarvik, Andrew Ben Stergachis · 1985 to 2026
$6.9M
MOLECULAR CONTROL OF GLOBIN GENE SWITCHINGR37DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1998 to 2006
$3.8M
MOLECULAR CONTROL OF HUMAN GLOBIN GENE SWITCHINGR01DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1992 to 2011
$1.6M
UW/FHCRC TRAINING IN HEMOGLOBINPATHIES, GENOMICS AND PROTEOMICSR90HG004152 · NHGRI · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 2006 to 2010
$370k
Globin Gene Switching: Molecular ControlR56DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 2007 to 2007
$78k
NHGRI NIH HHS R90 HG004152NIDDK NIH HHS DK 045365NIDDK NIH HHS R01 DK045365NIDDK NIH HHS R37 DK045365NIDDK NIH HHS R56 DK045365NIGMS NIH HHS GM 007454NIGMS NIH HHS T32 GM007454
6 · The paper itself

Abstract

Ancient DNA methodologies can be applied in the investigation of the genetics of extinct populations. A search for beta thalassemia mutations was performed on 49 Minoan individuals from the Bronze Age who were living in the island of Crete approximately 4000 Years Before Present (YBP). Standard precautionary measures were employed in the laboratory to ensure authenticity of the DNA extracted from the ancient bones, resulting in the successful analysis of DNA of 24 Minoans. DNA sequencing focused on the Intervening Sequence 1 (IVS-1) of the beta globin gene and its splicing junctions. 63% of the thalassemia mutations observed among modern Cretans reside in beta IVS-1. None of the Minoan individuals carried one of the IVS-1 mutations known to cause beta thalassemia; however, only one was expected to be observed if the average frequency of beta thalassemia heterozygotes in the Minoan population was the same with that of modern day Cretans (7.6%). One individual contained a C to G substitution in position 91 of the IVS-1, located 40 bp 5' to the intron 1/exon 2 junction. Functional studies indicated that the mutation did not affect mRNA splicing or stability, and most likely represented an innocent single nucleotide polymorphism.

Indexed as

FossilsMutationbeta-Globinsbeta-ThalassemiaDNAExonsGreeceHeLa CellsHeterozygoteHumansIntronsPhylogeographyPolymorphism, Single NucleotideRNA Splicingbeta-GlobinsDNA

Identifiers

PMID22000492
PMCPMC3249513
OpenAlexW2071057209

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.