Evidence map›Paper›PMID 21999289›Full record

ArticleJournal of the American Chemical Society2011

Multifunctional core-shell nanoparticles: discovery of previously invisible biomarkers.

Davide Tamburro, Claudia Fredolini, Virginia Espina, Temple A Douglas, Adarsh Ranganathan, Leopold Ilag, Weidong Zhou, Paul Russo, Benjamin H Espina, Giovanni Muto and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
  2. Article
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  12. A set of diagnostic tests for detection of active Babesia duncani infection.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2024
    Article
  13. Review
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  15. Review
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  17. Article
  18. Article
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 3 countries.

Davide TamburroCenter for Applied Proteomics and Molecular Medicine, George Mason University, Manassas, Virginia 20110, USA.
Claudia Fredolini
Virginia Espina
Temple A Douglas
Adarsh Ranganathan
Leopold Ilag
Weidong Zhou
Paul Russo
Benjamin H Espina
Giovanni Muto
Emanuel F Petricoin
Lance A Liotta
Alessandra Luchini
George Mason University · USStockholm University · SE

Funding

Nanotrap technology for one step preservation and amplification of cancer biomarkR33CA173359 · NCI · GEORGE MASON UNIVERSITY · PI LIOTTA, LANCE ALLEN · 2012 to 2014
$1.1M
Nanotechnology for One Step Concentration and Preservation of Labile Biomarkers iR21CA137706 · NCI · GEORGE MASON UNIVERSITY · PI LIOTTA, LANCE ALLEN · 2009 to 2010
$530k
A non-invasive nanotechnology-based skin patch for multiplexed diagnosticsR21AR061075 · NIAMS · GEORGE MASON UNIVERSITY · PI LIOTTA, LANCE ALLEN · 2011 to 2012
$360k
NCI NIH HHS 1R21CA137706-01NCI NIH HHS R21 CA137706NCI NIH HHS R33 CA173359NIAMS NIH HHS 1R21AR061075-01NIAMS NIH HHS R21 AR061075
6 · The paper itself

Abstract

Many low-abundance biomarkers for early detection of cancer and other diseases are invisible to mass spectrometry because they exist in body fluids in very low concentrations, are masked by high-abundance proteins such as albumin and immunoglobulins, and are very labile. To overcome these barriers, we created porous, buoyant, core-shell hydrogel nanoparticles containing novel high affinity reactive chemical baits for protein and peptide harvesting, concentration, and preservation in body fluids. Poly(N-isopropylacrylamide-co-acrylic acid) nanoparticles were functionalized with amino-containing dyes via zero-length cross-linking amidation reactions. Nanoparticles functionalized in the core with 17 different (12 chemically novel) molecular baits showed preferential high affinities (K(D) < 10(-11) M) for specific low-abundance protein analytes. A poly(N-isopropylacrylamide-co-vinylsulfonic acid) shell was added to the core particles. This shell chemistry selectively prevented unwanted entry of all size peptides derived from albumin without hindering the penetration of non-albumin small proteins and peptides. Proteins and peptides entered the core to be captured with high affinity by baits immobilized in the core. Nanoparticles effectively protected interleukin-6 from enzymatic degradation in sweat and increased the effective detection sensitivity of human growth hormone in human urine using multiple reaction monitoring analysis. Used in whole blood as a one-step, in-solution preprocessing step, the nanoparticles greatly enriched the concentration of low-molecular weight proteins and peptides while excluding albumin and other proteins above 30 kDa; this achieved a 10,000-fold effective amplification of the analyte concentration, enabling mass spectrometry (MS) discovery of candidate biomarkers that were previously undetectable.

Indexed as

AcrylamidesBiomarkers, TumorColoring AgentsGrowth HormoneHumansHydrogel, Polyethylene Glycol DimethacrylateMolecular StructureNanoparticlesParticle SizePeptidesPolymersPorosityProteinsSurface PropertiesAcrylamidesBiomarkers, TumorColoring AgentsGrowth HormoneHydrogel, Polyethylene Glycol DimethacrylateN-isopropylacrylamide-acrylic acid copolymerPeptidesPolymersProteins

Identifiers

PMID21999289
PMCPMC3223427
OpenAlexW1966724121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.