Evidence map›Paper›PMID 21998695›Full record

ArticlePloS one2011

Influence of uranium on bacterial communities: a comparison of natural uranium-rich soils with controls.

Laure Mondani, Karim Benzerara, Marie Carrière, Richard Christen, Yannick Mamindy-Pajany, Laureline Février, Nicolas Marmier, Wafa Achouak, Pascal Nardoux, Catherine Berthomieu and 1 more

Abstract readComparative Study
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  10. Complete Genome Sequences of FourMicrobiology resource announcements · 2019
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  13. Article
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  15. Frontiers in microbiology · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Laure MondaniCEA, DSV, IBEB, Laboratoire Interactions Protéine Métal, Saint-Paul-lez-Durance, France.
Karim Benzerara
Marie Carrière
Richard Christen
Yannick Mamindy-Pajany
Laureline Février
Nicolas Marmier
Wafa Achouak
Pascal Nardoux
Catherine Berthomieu
Virginie Chapon

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigated the influence of uranium on the indigenous bacterial community structure in natural soils with high uranium content. Radioactive soil samples exhibiting 0.26% - 25.5% U in mass were analyzed and compared with nearby control soils containing trace uranium. EXAFS and XRD analyses of soils revealed the presence of U(VI) and uranium-phosphate mineral phases, identified as sabugalite and meta-autunite. A comparative analysis of bacterial community fingerprints using denaturing gradient gel electrophoresis (DGGE) revealed the presence of a complex population in both control and uranium-rich samples. However, bacterial communities inhabiting uraniferous soils exhibited specific fingerprints that were remarkably stable over time, in contrast to populations from nearby control samples. Representatives of Acidobacteria, Proteobacteria, and seven others phyla were detected in DGGE bands specific to uraniferous samples. In particular, sequences related to iron-reducing bacteria such as Geobacter and Geothrix were identified concomitantly with iron-oxidizing species such as Gallionella and Sideroxydans. All together, our results demonstrate that uranium exerts a permanent high pressure on soil bacterial communities and suggest the existence of a uranium redox cycle mediated by bacteria in the soil.

Indexed as

Soil MicrobiologyBacteriaIronMicroscopyMineralsMolecular Sequence DataOxidation-ReductionSoilUraniumIronMineralsSoilUranium

Identifiers

PMID21998695
PMCPMC3187815

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.