Evidence map›Paper›PMID 21998572›Full record

ArticlePLoS computational biology2011

B cell activation triggered by the formation of the small receptor cluster: a computational study.

Beata Hat, Bogdan Kazmierczak, Tomasz Lipniacki

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. On convergence and asymptotic behaviour of semigroups of operators.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. A review of quantitative modeling of B cell responses to antigenic challenge.Journal of pharmacokinetics and pharmacodynamics · 2014
    Review
  9. Stochastic transitions in a bistable reaction system on the membrane.Journal of the Royal Society, Interface · 2013
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Beata HatInstitute of Fundamental Technological Research, Polish Academy of Sciences, Warsaw, Poland.
Bogdan Kazmierczak
Tomasz Lipniacki
Institute of Fundamental Technological Research · PLPolish Academy of Sciences · PL

Funding

Collaborative Research : Stochastic Modeling and Estimation of Gene TranscriptionR01GM086885 · NIGMS · RICE UNIVERSITY · PI KIMMEL, MAREK · 2008 to 2011
$1.7M
NIGMS NIH HHS R01 GM086885NIGMS NIH HHS R01-GM086885
6 · The paper itself

Abstract

We proposed a spatially extended model of early events of B cell receptors (BCR) activation, which is based on mutual kinase-receptor interactions that are characteristic for the immune receptors and the Src family kinases. These interactions lead to the positive feedback which, together with two nonlinearities resulting from the double phosphorylation of receptors and Michaelis-Menten dephosphorylation kinetics, are responsible for the system bistability. We demonstrated that B cell can be activated by a formation of a tiny cluster of receptors or displacement of the nucleus. The receptors and Src kinases are activated, first locally, in the locus of the receptor cluster or the region where the cytoplasm is the thinnest. Then the traveling wave of activation propagates until activity spreads over the whole cell membrane. In the models in which we assume that the kinases are free to diffuse in the cytoplasm, we found that the fraction of aggregated receptors, capable to initiate B cell activation decreases with the decreasing thickness of cytoplasm and decreasing kinase diffusion. When kinases are restricted to the cell membrane - which is the case for most of the Src family kinases - even a cluster consisting of a tiny fraction of total receptors becomes activatory. Interestingly, the system remains insensitive to the modest changes of total receptor level. The model provides a plausible mechanism of B cells activation due to the formation of small receptors clusters collocalized by binding of polyvalent antigens or arising during the immune synapse formation.

Indexed as

Models, ImmunologicalB-LymphocytesCell MembraneComputational BiologyHumansImmunological SynapsesLymphocyte ActivationReceptor AggregationReceptors, Antigen, B-Cellsrc-Family KinasesReceptors, Antigen, B-Cellsrc-Family Kinases

Identifiers

PMID21998572
PMCPMC3188507
OpenAlexW1999217103

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.