Evidence map›Paper›PMID 21997397›Full record

ArticleJournal of the American Society of Nephrology : JASN2011

APOL1 variants increase risk for FSGS and HIVAN but not IgA nephropathy.

Natalia Papeta, Krzysztof Kiryluk, Ami Patel, Roel Sterken, Nilgun Kacak, Holly J Snyder, Phil H Imus, Anand N Mhatre, Anil K Lawani, Bruce A Julian and 11 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 2 pooled it
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 2 syntheses or guidelines pooled it, 123 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Trial
  4. Trial
  5. Update on APOL1 and chronic kidney diseases in children.Pediatric nephrology (Berlin, Germany) · 2026
    Review
  6. Molecular Mechanisms of APOL1-Associated Kidney Disease.International journal of molecular sciences · 2026
    Review
  7. Review
  8. Estimating glomerular filtration rate with new equations: can one size ever fit all?Critical reviews in clinical laboratory sciences · 2023
    Review
  9. Observational
  10. Review
  11. Apolipoprotein L1 (APOL1) cation current in HEK-293 cells and in human podocytes.Pflugers Archiv : European journal of physiology · 2023
    Article
  12. Article
  13. Review
  14. GWAS in Mice Maps Susceptibility to HIV-Associated Nephropathy to theJournal of the American Society of Nephrology : JASN · 2022
    Article
  15. Article
  16. The key role of NLRP3 and STING in APOL1-associated podocytopathy.The Journal of clinical investigation · 2021
    Article
  17. Review
  18. Article
  19. APOL1-Associated Kidney Disease in Brazil.Kidney international reports · 2019
    Article
  20. Exome-Based Rare-Variant Analyses in CKD.Journal of the American Society of Nephrology : JASN · 2019
    Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 1 country.

Natalia PapetaDepartment of Medicine, Columbia University College of Physicians and Surgeons, New York, New York 10032, USA.
Krzysztof Kiryluk
Ami Patel
Roel Sterken
Nilgun Kacak
Holly J Snyder
Phil H Imus
Anand N Mhatre
Anil K Lawani
Bruce A Julian
Robert J Wyatt
Jan Novak
Christina M Wyatt
Michael J Ross
Jonathan A Winston
Mary E Klotman
David J Cohen
Gerald B Appel
Vivette D D'Agati
Paul E Klotman
Ali G Gharavi
Icahn School of Medicine at Mount Sinai · USNew York University · USColumbia University · USUniversity of Alabama at Birmingham · USDuke University · USLe Bonheur Children's Hospital · US

Funding

VIRAL PATHOGENESIS OF HIV ASSOCIATED NEPHROPATHYP01DK056492 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI KLOTMAN, PAUL EVAN · 1999 to 2021
$27.8M
Elucidating IgA Nephropathy through Genetic Studies of IgA1 GlycosylationR01DK082753 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GHARAVI, ALI G, NOVAK, JAN · 2009 to 2024
$8.7M
Identifying the earliest events in HIV-1 associated nephropathy via genome-wideR01DK087626 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GHARAVI, ALI G · 2010 to 2014
$1.7M
Quantitative Genetics of Defective IgA1 Glycosylation in IgA NephropathyK23DK090207 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KIRYLUK, KRZYSZTOF · 2011 to 2014
$729k
NIDDK NIH HHS 1K23DK090207NIDDK NIH HHS DK056492NIDDK NIH HHS DK082753NIDDK NIH HHS DK087626NIDDK NIH HHS K23 DK090207NIDDK NIH HHS P01 DK056492NIDDK NIH HHS R01 DK082753NIDDK NIH HHS R01 DK087626
6 · The paper itself

Abstract

A chromosome 22q13 locus strongly associates with increased risk for idiopathic focal segmental glomerulosclerosis (FSGS), HIV-1-associated nephropathy (HIVAN), and hypertensive ESRD among individuals of African descent. Although initial studies implicated MYH9, more recent analyses localized the strongest association within the neighboring APOL1 gene. In this replication study, we examined the six top-most associated variants in APOL1 and MYH9 in an independent cohort of African Americans with various nephropathies (44 with FSGS, 21 with HIVAN, 32 with IgA nephropathy, and 74 healthy controls). All six variants associated with FSGS and HIVAN (additive ORs, 1.8 to 3.0; P values 3 × 10(-2) to 5 × 10(-5)) but not with IgA nephropathy. In conditional and haplotype analyses, two APOL1 haplotypes accounted for virtually all of the association with FSGS and HIVAN on chromosome 22q13 (haplotype P value = 5.6 × 10(-8)). To assess the role of MYH9 deficiency in nephropathy, we crossbred Myh9-haploinsufficient mice (Myh9(+/-)) with HIV-1 transgenic mice. Myh9(+/-) mice were healthy and did not demonstrate overt proteinuria or nephropathy, irrespective of the presence of the HIV-1 transgene. These data further support the strong association of genetic variants in APOL1 with susceptibility to FSGS and HIVAN among African Americans.

Indexed as

AIDS-Associated NephropathyAnimalsApolipoprotein L1ApolipoproteinsBlack or African AmericanDisease Models, AnimalGenetic VariationGlomerulonephritis, IGAGlomerulosclerosis, Focal SegmentalHaplotypesHumansLipoproteins, HDLMiceMice, TransgenicMolecular Motor ProteinsMyosin Heavy ChainsAPOL1 protein, humanApolipoprotein L1ApolipoproteinsLipoproteins, HDLMolecular Motor ProteinsMYH9 protein, humanMyh9 protein, mouseMyosin Heavy ChainsNonmuscle Myosin Type IIA

Identifiers

PMID21997397
PMCPMC3231781
OpenAlexW2148745148

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.