ArticleViruses2010
Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop.
Article in Viruses, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
15 citing papers in PubMed.
- Automated annotation and validation of human respiratory virus sequences using VADR.Database : the journal of biological databases and curation · 2025Article
- The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine.Database : the journal of biological databases and curation · 2021Article
- FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science.Nature communications · 2019Article
- Minimum Information about an Uncultivated Virus Genome (MIUViG).Nature biotechnology · 2019Article
- Invertebrate RNA virus diversity from a taxonomic point of view.Journal of invertebrate pathology · 2017Review
- Virus Variation Resource - improved response to emergent viral outbreaks.Nucleic acids research · 2017Article
- Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation.Nucleic acids research · 2016Article
- Molecular investigation of a full-length genome of a Q1-like IBV strain isolated in Italy in 2013.Virus research · 2015Article
- NCBI viral genomes resource.Nucleic acids research · 2015Article
- Recognition of Protein-coding Genes Based on Z-curve Algorithms.Current genomics · 2014Article
- Virus nomenclature below the species level: a standardized nomenclature for natural variants of viruses assigned to the family Filoviridae.Archives of virology · 2013Article
- Viral proteins originated de novo by overprinting can be identified by codon usage: application to the "gene nursery" of Deltaretroviruses.PLoS computational biology · 2013Article
- Microbial virus genome annotation-mustering the troops to fight the sequence onslaught.Virology · 2012Review
- A beginner's guide to eukaryotic genome annotation.Nature reviews. Genetics · 2012Review
- Solving the Problem: Genome Annotation Standards before the Data Deluge.Standards in genomic sciences · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Improvements in DNA sequencing technologies portend a new era in virology and could possibly lead to a giant leap in our understanding of viral evolution and ecology. Yet, as viral genome sequences begin to fill the world's biological databases, it is critically important to recognize that the scientific promise of this era is dependent on consistent and comprehensive genome annotation. With this in mind, the NCBI Genome Annotation Workshop recently hosted a study group tasked with developing sequence, function, and metadata annotation standards for viral genomes. This report describes the issues involved in viral genome annotation and reviews policy recommendations presented at the NCBI Annotation Workshop.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.