Evidence map›Paper›PMID 21994452›Full record

ArticleJournal of virology2011

Identification and characterization of an immunogenic hybrid epitope formed by both HIV gp120 and human CD4 proteins.

George K Lewis, Timothy R Fouts, Sani Ibrahim, Brian M Taylor, Rachita Salkar, Yongjun Guan, Roberta Kamin-Lewis, James E Robinson, Anthony L Devico

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  6. Review
  7. Article
  8. Article
  9. Diverse specificity and effector function among human antibodies to HIV-1 envelope glycoprotein epitopes exposed by CD4 binding.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

  • Erratum issued
    Robinson, James E [added]
5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

George K LewisInstitute of Human Virology, Department of Medicine, University of Maryland School of Medicine, University of Maryland, Baltimore, 725 West Lombard Street, Baltimore, MD 21201, USA.
Timothy R Fouts
Sani Ibrahim
Brian M Taylor
Rachita Salkar
Yongjun Guan
Roberta Kamin-Lewis
James E Robinson
Anthony L Devico
University of Maryland, Baltimore · USAhmadu Bello University · NGProfectus Biosciences (United States) · US

Funding

UM-IHV AITRP in NigeriaD43TW001041 · FIC · UNIVERSITY OF MARYLAND BALTIMORE · PI CHARURAT, MANHATTAN E · 1998 to 2015
$9.2M
Broadly Neutralizing Monoclonal Antibodies Against HIV-1R01AI087181 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LEWIS, GEORGE K · 2010 to 2014
$2.7M
Broad Neutralizing Monoclonal Antibodies From HIV ControllersR01AI084830 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LEWIS, GEORGE K · 2009 to 2010
$851k
FIC NIH HHS 5D43 TW 01041-05FIC NIH HHS D43 TW001041NIAID NIH HHS R01 AI084830NIAID NIH HHS R01 AI087181PHS HHS R01 A160481-01A1-02
6 · The paper itself

Abstract

Certain antibodies from HIV-infected humans bind conserved transition state (CD4 induced [CD4i]) domains on the HIV envelope glycoprotein, gp120, and demonstrate extreme dependence on the formation of a gp120-human CD4 receptor complex. The epitopes recognized by these antibodies remain undefined although recent crystallographic studies of the anti-CD4i monoclonal antibody (MAb) 21c suggest that contacts with CD4 as well as gp120 might occur. Here, we explore the possibility of hybrid epitopes that demand the collaboration of both gp120 and CD4 residues to enable antibody reactivity. Analyses with a panel of human anti-CD4i MAbs and gp120-CD4 antigens with specific mutations in predicted binding domains revealed one putative hybrid epitope, defined by the human anti-CD4i MAb 19e. In virological and immunological tests, MAb 19e did not bind native or constrained gp120 except in the presence of CD4. This contrasted with other anti-CD4i MAbs, including MAb 21c, which bound unliganded, full-length gp120 held in a constrained conformation. Conversely, MAb 19e exhibited no specific reactivity with free human CD4. Computational modeling of MAb 19e interactions with gp120-CD4 complexes suggested a distinct binding profile involving antibody heavy chain interactions with CD4 and light chain interactions with gp120. In accordance, targeted mutations in CD4 based on this model specifically reduced MAb 19e interactions with stable gp120-CD4 complexes that retained reactivity with other anti-CD4i MAbs. These data represent a rare instance of an antibody response that is specific to a pathogen-host cell protein interaction and underscore the diversity of immunogenic CD4i epitope structures that exist during natural infection.

Indexed as

Antibodies, MonoclonalAntibody AffinityCD4 AntigensEpitopesHIV AntibodiesHIV Envelope Protein gp120HumansModels, MolecularMolecular Dynamics SimulationProtein BindingAntibodies, MonoclonalCD4 AntigensEpitopesHIV AntibodiesHIV Envelope Protein gp120

Identifiers

PMID21994452
PMCPMC3233132
OpenAlexW2103912859

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.