Evidence map›Paper›PMID 21992591›Full record

ArticleJournal of biomedical semantics2011

A cascade of classifiers for extracting medication information from discharge summaries.

Scott Russell Halgrim, Fei Xia, Imre Solti, Eithon Cadag, Ozlem Uzuner

Abstract read
In one paragraph

Article in Journal of biomedical semantics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. AI-Based Automation for Medication Reconciliation: Scoping Review.Journal of medical Internet research · 2026
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  8. A study of actions in operative notes.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Scott Russell HalgrimUniversity of Washington, PO Box 543450, Seattle, WA 98195, USA. captnpi@uw.edu.
Fei Xia
Imre Solti
Eithon Cadag
Ozlem Uzuner

Funding

Informatics for Integrating Biology/ the Bedside (RMI)U54LM008748 · NLM · BRIGHAM AND WOMEN'S HOSPITAL · PI KOHANE, ISAAC S. · 2004 to 2013
$39.0M
Increasing Clinical Trial Enrollment: A Semi-Automated Patient Centered ApproachR00LM010227 · NLM · CINCINNATI CHILDRENS HOSP MED CTR · PI SOLTI, IMRE · 2010 to 2012
$727k
Increasing Clinical Trial Enrollment: A Semi-Automated Patient Centered ApproachK99LM010227 · NLM · UNIVERSITY OF WASHINGTON · PI SOLTI, IMRE · 2009 to 2009
$84k
NLM NIH HHS K99 LM010227NLM NIH HHS R00 LM010227NLM NIH HHS U54 LM008748
6 · The paper itself

Abstract

backgroundExtracting medication information from clinical records has many potential applications, and recently published research, systems, and competitions reflect an interest therein. Much of the early extraction work involved rules and lexicons, but more recently machine learning has been applied to the task.

methodsWe present a hybrid system consisting of two parts. The first part, field detection, uses a cascade of statistical classifiers to identify medication-related named entities. The second part uses simple heuristics to link those entities into medication events.

resultsThe system achieved performance that is comparable to other approaches to the same task. This performance is further improved by adding features that reference external medication name lists.

conclusionsThis study demonstrates that our hybrid approach outperforms purely statistical or rule-based systems. The study also shows that a cascade of classifiers works better than a single classifier in extracting medication information. The system is available as is upon request from the first author.

Identifiers

PMID21992591
PMCPMC3194174

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.