Evidence map›Paper›PMID 21990266›Full record

ArticlePediatric blood & cancer2012

Clinical significance of NTRK family gene expression in neuroblastomas.

Jennifer E Light, Hiroshi Koyama, Jane E Minturn, Ruth Ho, Anisha M Simpson, Radhika Iyer, Jennifer L Mangino, Venkatadri Kolla, Wendy B London, Garrett M Brodeur

Open access · greenAbstract read
In one paragraph

Article in Pediatric blood & cancer, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

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  12. International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jennifer E LightDivision of Oncology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Hiroshi Koyama
Jane E Minturn
Ruth Ho
Anisha M Simpson
Radhika Iyer
Jennifer L Mangino
Venkatadri Kolla
Wendy B London
Garrett M Brodeur
Children's Hospital of Philadelphia · US

Funding

Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ANDERSON, JAMES R · 2003 to 2013
$67.5M
Neuroblastoma Biology and TherapyP01CA097323 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BRODEUR, GARRETT M · 2003 to 2007
$10.6M
CANCER RESEARCH TRAINING PROGRAMT32CA009615 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Gregory L Beatty, MICHAEL D HOGARTY · 1988 to 2026
$10.4M
Targeting Oncogenic ALK Signaling in NeuroblastomaR01CA140198 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI MOSSE, YAEL P · 2009 to 2023
$5.6M
Trk Expression and Inhibition in Human NeuroblastomasR01CA094194 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BRODEUR, GARRETT M · 2002 to 2012
$3.7M
NCI NIH HHS P01 CA097323NCI NIH HHS P01-CA097323NCI NIH HHS R01 CA094194NCI NIH HHS R01-CA094194NCI NIH HHS R01 CA140198NCI NIH HHS R01 CA140198-01NCI NIH HHS T32 CA009615NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA98413-06
6 · The paper itself

Abstract

backgroundNeuroblastomas (NBs) are characterized by clinical heterogeneity, from spontaneous regression to relentless progression. The pattern of NTRK family gene expression contributes to these disparate behaviors. TrkA/NTRK1 is expressed in favorable NBs that regress or differentiate, whereas TrkB/NTRK2 and its ligand brain-derived neurotrophic factor (BDNF) are co-expressed in unfavorable NBs, representing an autocrine survival pathway. We determined the significance of NTRK family gene expression in a large, representative set of primary NBs. PATIENTS AND

methodsWe analyzed the expression of the following genes in 814 NBs using quantitative real-time reverse transcriptase polymerase chain reaction (RT-PCR): NTRK1, NTRK2, NTRK3, P75/NGFR, nerve growth factor (NGF), BDNF, IGFR1, and EGFR. Expression (high vs. low) was dichotomized by median expression value and compared to clinical and biological variables as well as outcome.

resultsHigh NTRK1 expression was strongly correlated with favorable age, stage, MYCN status, histology, ploidy, risk group, and outcome (P < 0.0001 for all). However, it did not add significantly to the panel of prognostic variables currently used for cooperative group trials. NTRK2 expression was associated with risk factors but not with outcome. High NGF expression was also associated with most risk factors and weakly with unfavorable outcome.

conclusionsHigh expression of NTRK1 is strongly associated with favorable risk factors and outcome in a large, representative population of NB patients. It did not add significantly to the current risk prediction algorithm, but it may contribute to future expression classifiers. Indeed, prospective assessment of NTRK1 and NTRK2 expression will identify tumors that would be candidates for NTRK-targeted therapy, either alone or in combination with conventional agents.

Indexed as

Biomarkers, TumorHumansInfantNerve Growth FactorsNeuroblastomaN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogene ProteinsPrognosisReceptor, Nerve Growth FactorReceptor, trkAReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSurvival RateBiomarkers, TumorMYCN protein, humanNerve Growth FactorsN-Myc Proto-Oncogene ProteinNuclear ProteinsOncogene ProteinsReceptor, Nerve Growth FactorReceptor, trkARNA, Messenger

Identifiers

PMID21990266
PMCPMC3258457
OpenAlexW1994510632

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.