Evidence map›Paper›PMID 21989929›Full record

ArticleProteins2011

A genetically encoded, high-signal-to-noise maltose sensor.

Jonathan S Marvin, Eric R Schreiter, Ileabett M Echevarría, Loren L Looger

Open access · bronzeAbstract read
In one paragraph

Article in Proteins, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 129 citations in OpenAlex.

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  15. iATPSnFR2: A high-dynamic-range fluorescent sensor for monitoring intracellular ATP.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Jonathan S MarvinJanelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia 20147, USA. marvinj@janelia.hhmi.org
Eric R Schreiter
Ileabett M Echevarría
Loren L Looger
Howard Hughes Medical Institute · USUniversity of Puerto Rico at Río Piedras · PRUniversity of Puerto Rico, Medical Sciences Campus · PR

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

We describe the generation of a family of high-signal-to-noise single-wavelength genetically encoded indicators for maltose. This was achieved by insertion of circularly permuted fluorescent proteins into a bacterial periplasmic binding protein (PBP), Escherichia coli maltodextrin-binding protein, resulting in a four-color family of maltose indicators. The sensors were iteratively optimized to have sufficient brightness and maltose-dependent fluorescence increases for imaging, under both one- and two-photon illumination. We demonstrate that maltose affinity of the sensors can be tuned in a fashion largely independent of the fluorescent readout mechanism. Using literature mutations, the binding specificity could be altered to moderate sucrose preference, but with a significant loss of affinity. We use the soluble sensors in individual E. coli bacteria to observe rapid maltose transport across the plasma membrane, and membrane fusion versions of the sensors on mammalian cells to visualize the addition of maltose to extracellular media. The PBP superfamily includes scaffolds specific for a number of analytes whose visualization would be critical to the reverse engineering of complex systems such as neural networks, biosynthetic pathways, and signal transduction cascades. We expect the methodology outlined here to be useful in the development of indicators for many such analytes.

Indexed as

Amino Acid SequenceBiosensing TechniquesEscherichia coliEscherichia coli ProteinsGreen Fluorescent ProteinsHEK293 CellsHumansLigandsMaltose-Binding ProteinsPeriplasmic Binding ProteinsProtein BindingProtein ConformationSpectrometry, FluorescenceEscherichia coli Proteinsgreen fluorescent protein, Aequorea victoriaGreen Fluorescent ProteinsLigandsMaltose-Binding ProteinsPeriplasmic Binding Proteins

Identifiers

PMID21989929
PMCPMC3265398
OpenAlexW2071333655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.