Evidence map›Paper›PMID 21989915›Full record

ArticleDevelopment (Cambridge, England)2011

Analysis of gene networks in white adipose tissue development reveals a role for ETS2 in adipogenesis.

Kivanç Birsoy, Ryan Berry, Tim Wang, Ozge Ceyhan, Saeed Tavazoie, Jeffrey M Friedman, Matthew S Rodeheffer

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 1 synthesis or guideline pooled it, 104 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. The critical role of LRG1 in pathological fibrosis.Journal of molecular medicine (Berlin, Germany) · 2025
    Review
  5. Review
  6. ETS emerges to heat up adipose.Genes & development · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Bioactive Phytochemicals fromInternational journal of molecular sciences · 2022
    Article
  18. Article
  19. Review
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Kivanç BirsoyLaboratory of Molecular Genetics, The Rockefeller University, 1230 York Avenue, New York, NY 10065, USA.
Ryan Berry
Tim Wang
Ozge Ceyhan
Saeed Tavazoie
Jeffrey M Friedman
Matthew S Rodeheffer
Princeton University · USRockefeller University · USWhitehead Institute for Biomedical Research · USYale Cancer Center · US

Funding

THE GENOMIC BASIS OF HERITABLE OBESITY IN MICER01DK041096 · NIDDK · ROCKEFELLER UNIVERSITY · PI FRIEDMAN, JEFFREY M · 1989 to 2013
$4.9M
Cellular & molecular mechanisms of white adipose tissue mass regulationR01DK090489 · NIDDK · YALE UNIVERSITY · PI RODEHEFFER, MATTHEW S · 2011 to 2020
$3.8M
Predictive Learning of Transcriptional NetworksR01HG003219 · NHGRI · PRINCETON UNIVERSITY · PI TAVAZOIE, SAEED F · 2004 to 2015
$3.7M
Cellular and molecular mechanisms of white adipose tissue regulation in development and diseaseR56DK090489 · NIDDK · YALE UNIVERSITY · PI RODEHEFFER, MATTHEW S · 2016 to 2016
$209k
NHGRI NIH HHS R01 HG003219NIDDK NIH HHS DK041096NIDDK NIH HHS DK090489NIDDK NIH HHS R01 DK041096NIDDK NIH HHS R01 DK090489NIDDK NIH HHS R56 DK090489
6 · The paper itself

Abstract

Obesity is characterized by an expansion of white adipose tissue mass that results from an increase in the size and the number of adipocytes. However, the mechanisms responsible for the formation of adipocytes during development and the molecular mechanisms regulating their increase and maintenance in adulthood are poorly understood. Here, we report the use of leptin-luciferase BAC transgenic mice to track white adipose tissue (WAT) development and guide the isolation and molecular characterization of adipocytes during development using DNA microarrays. These data reveal distinct transcriptional programs that are regulated during murine WAT development in vivo. By using a de novo cis-regulatory motif discovery tool (FIRE), we identify two early gene clusters whose promoters show significant enrichment for NRF2/ETS transcription factor binding sites. We further demonstrate that Ets transcription factors, but not Nrf2, are regulated during early adipogenesis and that Ets2 is essential for the normal progression of the adipocyte differentiation program in vitro. These data identify ETS2 as a functionally important transcription factor in adipogenesis and its possible role in regulating adipose tissue mass in adults can now be tested. Our approach also provides the basis for elucidating the function of other gene networks during WAT development in vivo. Finally these data confirm that although gene expression during adipogenesis in vitro recapitulates many of the patterns of gene expression in vivo, there are additional developmental transitions in pre and post-natal adipose tissue that are not evident in cell culture systems.

Indexed as

Gene Expression Regulation, DevelopmentalGene Regulatory Networks3T3-L1 CellsAdipogenesisAdipose Tissue, WhiteAnimalsGene Knockdown TechniquesHumansMaleMiceMice, Inbred C57BLMice, TransgenicMicroarray AnalysisNF-E2-Related Factor 2Promoter Regions, GeneticProto-Oncogene Protein c-ets-1Ets1 protein, mouseEts2 protein, mouseNfe2l2 protein, mouseNF-E2-Related Factor 2Proto-Oncogene Protein c-ets-1Proto-Oncogene Protein c-ets-2

Identifiers

PMID21989915
PMCPMC3190384
OpenAlexW2059846376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.