Evidence map›Paper›PMID 21989738›Full record

ArticleInternational journal of cancer2012

CIITA is silenced by epigenetic mechanisms that prevent the recruitment of transactivating factors in rhabdomyosarcoma cells.

Priya Londhe, Bo Zhu, Jinu Abraham, Charles Keller, Judith Davie

Open access · greenAbstract read
In one paragraph

Article in International journal of cancer, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. CIITA/PRMT5 promote CD4BMC medicine · 2026
    Article
  5. Review
  6. CAR-T cell immunotherapy in rhabdomyosarcoma.Journal of translational medicine · 2026
    Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Pattern recognition receptors in health and diseases.Signal transduction and targeted therapy · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Priya LondheDepartment of Biochemistry and Molecular Biology, Southern Illinois University School of Medicine, Carbondale, IL, USA.
Bo Zhu
Jinu Abraham
Charles Keller
Judith Davie
Southern Illinois University School of Medicine · USOregon Health & Science University · US

Funding

Therapeutic Targets in Alveolar RhabdomyosarcomaR01CA133229 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KELLER, CHARLES · 2008 to 2012
$1.9M
Understanding the Role of the Class II Activator, CIITA, in Skeletal MuscleR15AR060017 · NIAMS · SOUTHERN ILLINOIS UNIVERSITY CARBONDALE · PI DAVIE, JUDITH KIMBERLY · 2011 to 2011
$393k
NCI NIH HHS R01 CA133229NIAMS NIH HHS R15 AR060017PHS HHS RAR 060017A
6 · The paper itself

Abstract

Rhabdomyosarcomas (RMS) are highly malignant pediatric sarcomas. We have discovered that the gene encoding the major histocompatibilty complex class II transactivator, CIITA, is silenced in cells representing both major subtypes of RMS. Silencing of CIITA prevents the IFN-γ inducible expression of MHC class II genes in these cells. Overexpression of CIITA in these cells can restore MHC expression. We have found that IFN-γ signaling is intact in these cells, but pSTAT1 and IRF1 do not bind to the CIITA PIV promoter. The CIITA promoter is not hypermethylated in RD (ERMS) cells but does show a modestly enhanced methylation status in SJRH30 (ARMS) cells. We have found that histone acetylation, which normally increases on the CIITA PIV promoter following IFN-γ treatment, is blocked in both types of RMS cells. In RD cells, treatment with a histone deacetylase inhibitor (TSA) reverses the silencing of CIITA. In SJRH30 cells, treatment with DNA methyltransferase inhibitors and TSA cooperatively restores CIITA expression. Surprisingly, we have also shown that the expression of two components of the immunoproteasome, which are embedded in the class II locus, is stimulated by IFN-γ in certain RMS cells in the absence of stimulation by CIITA. CIITA overexpression can also activate the expression of these genes, indicating that the immunoproteasome genes LMP2 and LMP7 can be activated by both CIITA dependent and CIITA independent pathways.

Indexed as

Epigenesis, GeneticGene SilencingAcetylationAzacitidineCell Line, TumorChromatin ImmunoprecipitationDecitabineFlow CytometryGene Expression ProfilingHistone Deacetylase InhibitorsHistonesHumansHydroxamic AcidsInterferon-gammaNuclear ProteinsPromoter Regions, GeneticAzacitidineDecitabineHistone Deacetylase InhibitorsHistonesHydroxamic AcidsInterferon-gammaMHC class II transactivator proteinNuclear ProteinsTrans-Activatorstrichostatin A

Identifiers

PMID21989738
PMCPMC3271171
OpenAlexW2013584312

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.