Evidence map›Paper›PMID 21987770›Full record

ArticleThe Journal of infectious diseases2011

Contribution of Sec61α to the life cycle of Ebola virus.

Ayaka Iwasa, Peter Halfmann, Takeshi Noda, Masaaki Oyama, Hiroko Kozuka-Hata, Shinji Watanabe, Masayuki Shimojima, Tokiko Watanabe, Yoshihiro Kawaoka

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Crystal structure of Marburg virus VP24.Journal of virology · 2014
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ayaka IwasaDivision of Virology, Department of Microbiology and Immunology, University of Tokyo, Tokyo, Japan.
Peter Halfmann
Takeshi Noda
Masaaki Oyama
Hiroko Kozuka-Hata
Shinji Watanabe
Masayuki Shimojima
Tokiko Watanabe
Yoshihiro Kawaoka
The University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSimilar to other viruses, the viral proteins of Ebola virus (EBOV) interact with a variety of host proteins for its replication. Of the 7 structural proteins encoded in the EBOV genome, VP24 is the smallest and is multifunctional.

methodsTo identify host factors that interact with VP24 and are required for EBOV replication, we transfected 293 cells with plasmid expressing FLAG- and HA-tagged VP24, immunoprecipitated the host proteins that bound to VP24, and analyzed the immunoprecipitants with use of mass spectrometry.

resultsOf the 68 candidate host proteins identified, we selected Sec61α because of its similar intracellular localization to that of VP24 (ie, perinuclear region), its involvement in various biological functions, and its roles in pathogenesis, such as type 2 diabetes and hepatosteatosis, and investigated its possible role in the EBOV life cycle. Our results suggest that Sec61α is not involved in EBOV entry, interferon antagonism by VP24, nucleocapsid formation, or budding. However, Sec61α colocalized with VP24 contributed to the ability of VP24 to inhibit EBOV genome transcription and reduced the polymerase activity of EBOV.

conclusionsThe present study indicates that Sec61α is a host protein involved in EBOV replication, specifically in EBOV genome transcription and replication.

Indexed as

EbolavirusGene SilencingGenome, ViralHEK293 CellsHumansMembrane ProteinsRNA, Small InterferingSEC Translocation ChannelsTranscription, GeneticVirus InternalizationVirus ReplicationMembrane ProteinsRNA, Small InterferingSEC61A1 protein, humanSEC Translocation Channels

Identifiers

PMID21987770
PMCPMC3189986
OpenAlexW2161244001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.