Evidence map›Paper›PMID 21985007›Full record

ArticleNature methods2011

MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes.

Koen J T Venken, Karen L Schulze, Nele A Haelterman, Hongling Pan, Yuchun He, Martha Evans-Holm, Joseph W Carlson, Robert W Levis, Allan C Spradling, Roger A Hoskins and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 436 papers.

0numbers the graph read from it
0cells of the map it votes in
436citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

436 citing papers in PubMed, 745 citations in OpenAlex.

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376 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Koen J T VenkenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA. kv134369@bcm.edu
Karen L Schulze
Nele A Haelterman
Hongling Pan
Yuchun He
Martha Evans-Holm
Joseph W Carlson
Robert W Levis
Allan C Spradling
Roger A Hoskins
Hugo J Bellen
Baylor College of Medicine · USHoward Hughes Medical Institute · USLawrence Berkeley National Laboratory · USCarnegie Institution for Science · US

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TOLIAS, KIMBERLY R · 1988 to 2013
$29.4M
Transposon induced disruption of most Drosophila genesR01GM067858 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2003 to 2020
$15.7M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
Howard Hughes Medical InstituteNIGMS NIH HHS 2R01 GM067858NIGMS NIH HHS R01 GM067858NIGMS NIH HHS T32 GM07526-33
6 · The paper itself

Abstract

We demonstrate the versatility of a collection of insertions of the transposon Minos-mediated integration cassette (MiMIC), in Drosophila melanogaster. MiMIC contains a gene-trap cassette and the yellow+ marker flanked by two inverted bacteriophage ΦC31 integrase attP sites. MiMIC integrates almost at random in the genome to create sites for DNAmanipulation. The attP sites allow the replacement of the intervening sequence of the transposon with any other sequence through recombinase-mediated cassette exchange (RMCE). We can revert insertions that function as gene traps and cause mutant phenotypes to revert to wild type by RMCE and modify insertions to control GAL4 or QF overexpression systems or perform lineage analysis using the Flp recombinase system. Insertions in coding introns can be exchanged with protein-tag cassettes to create fusion proteins to follow protein expression and perform biochemical experiments. The applications of MiMIC vastly extend the D. melanogaster toolkit.

Indexed as

AnimalsBioengineeringDNA Transposable ElementsDrosophila melanogasterDrosophila ProteinsGene Expression RegulationIntronsMutagenesis, InsertionalRecombinant Fusion ProteinsRepetitive Sequences, Nucleic AcidDNA Transposable ElementsDrosophila ProteinsRecombinant Fusion Proteins

Identifiers

PMID21985007
PMCPMC3191940
OpenAlexW2122132730

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.