Evidence map›Paper›PMID 21984476›Full record

ArticleNucleic acids research2011

Rational design of a small molecule-responsive intramer controlling transgene expression in mammalian cells.

David Ausländer, Markus Wieland, Simon Ausländer, Marcel Tigges, Martin Fussenegger

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Aptamer-based targeted therapy.Advanced drug delivery reviews · 2018
    Review
  9. Article
  10. Article
  11. Engineering Gene Circuits for Mammalian Cell-Based Applications.Cold Spring Harbor perspectives in biology · 2016
    Review
  12. Article
  13. Review
  14. Article
  15. Aptamer-Drug Conjugates.Bioconjugate chemistry · 2015
    Review
  16. Mammalian synthetic biology: emerging medical applications.Journal of the Royal Society, Interface · 2015
    Review
  17. Article
  18. Article
  19. Article
  20. Synthetic biology and personalized medicine.Medical principles and practice : international journal of the Kuwait University, Health Science Centre · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

David AusländerETH Zurich, Department of Biosystems Science and Bioengineering (D-BSSE), Mattenstrasse 26, CH-4058 Basel, Switzerland.
Markus Wieland
Simon Ausländer
Marcel Tigges
Martin Fussenegger
ETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aptamers binding proteins or small molecules have been shown to be versatile and powerful building blocks for the construction of artificial genetic switches. In this study, we present a novel aptamer-based construct regulating the Tet Off system in a tetracycline-independent manner thus achieving control of transgene expression. For this purpose, a TetR protein-inhibiting aptamer was engineered for use in mammalian cells, enabling the RNA-responsive control of the tetracycline-dependent transactivator (tTA). By rationally attaching the theophylline aptamer as a sensor, the inhibitory TetR aptamer and thus tTA activity became dependent on the ligand of the sensor aptamer. Addition of the small molecule theophylline resulted in enhanced binding to the corresponding protein in vitro and in inhibition of reporter gene expression in mammalian cell lines. By using aptamers as adaptors in order to control protein activity by a predetermined small molecule, we present a simple and straightforward approach for future applications in the field of Chemical Biology. Moreover, aptamer-based control of the widely used Tet system introduces a new layer of regulation thereby facilitating the construction of more complex gene networks.

Indexed as

Gene Expression RegulationTransgenesAnimalsAptamers, NucleotideBase SequenceCHO CellsCricetinaeCricetulusHEK293 CellsHumansMolecular Sequence DataRepressor ProteinsTheophyllineAptamers, NucleotideRepressor Proteinstetracycline resistance-encoding transposon repressor proteinTheophylline

Identifiers

PMID21984476
PMCPMC3239198
OpenAlexW2098935120

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.