Evidence map›Paper›PMID 21982866›Full record

ArticleChemistry and physics of lipids2011

Molecular dynamic simulation study of cholesterol and conjugated double bonds in lipid bilayers.

Guijun Zhao, P V Subbaiah, Evan Mintzer, See-Wing Chiu, Eric Jakobsson, H L Scott

Open access · greenAbstract read
In one paragraph

Article in Chemistry and physics of lipids, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 10 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Guijun ZhaoInstitute of Medical Genetics, Shanghai Children's Hospital, Shanghai Jiao Tong University, Shanghai, China.
P V Subbaiah
Evan Mintzer
See-Wing Chiu
Eric Jakobsson
H L Scott
Illinois Institute of Technology · USNational Center for Supercomputing Applications · USUniversity of Illinois Chicago · USUniversity of Illinois Urbana-Champaign · USYeshiva University · US

Funding

NATIONAL CENTER FOR DESIGN:BIOMIMETIC NANOCONDUCTOR(RMI)PN2EY016570 · NEI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JAKOBSSON, ERIC G · 2005 to 2009
$6.6M
ROLE OF SPHINGOMYELIN IN LIPOPROTEIN METABOLISMR01HL068585 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2002 to 2012
$3.3M
Physiological Significance of Conjugated Double Bonds in Membrane LipidsR21DK078165 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2008 to 2009
$432k
Role of Sphingomyelin in Lipoprotein MetabolismR56HL068585 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SUBBAIAH, PAPASANI V · 2008 to 2008
$393k
Center for Design:Biomimetic Nanoconductors (RMI)PN1EY016570 · NEI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JAKOBSSON, ERIC G · 2004 to 2004
$66k
NEI NIH HHS 2 PN2 EY016570BNEI NIH HHS PN1 EY016570NEI NIH HHS PN2 EY016570NHLBI NIH HHS HL 68585NHLBI NIH HHS R01 HL068585NHLBI NIH HHS R56 HL068585NIDDK NIH HHS DK78165NIDDK NIH HHS R21 DK078165
6 · The paper itself

Abstract

Conjugated linoleic acids (CLA) are found naturally in dairy products. Two isomers of CLA, that differ only in the location of cis and trans double bonds, are found to have distinct and different biological effects. The cis 9 trans 11 (C9T11) isomer is believed to have anti-carcinogenic effects, while the trans 10 cis 12 (T10C12) isomer is believed to be associated with anti-obesity effects. In this paper we extend earlier molecular dynamics (MD) simulations of pure CLA-phosphatidylcholine bilayers to investigate the comparative effects of cholesterol on bilayers composed of the two respective isomers. Simulations of phosphatidylcholine lipid bilayers in which the sn-2 chains contained one of the two isomers of CLA were performed in which, for each isomer, the simulated bilayers contained 10% and 30% cholesterol (Chol). From MD trajectories we calculate and compare structural properties of the bilayers, including areas per molecule, thickness of bilayers, tilt angle of cholesterols, order parameter profiles, and one and two-dimensional radial distribution function (RDF), as functions of Chol concentration. While the structural effect of cholesterol is approximately the same for both isomers, we find differences at an atomistic level in order parameter profiles and in two-dimensional radial distribution functions.

Indexed as

Molecular Dynamics SimulationCholesterolComputer SimulationLinoleic Acids, ConjugatedLipid BilayersCholesterolLinoleic Acids, ConjugatedLipid Bilayers

Identifiers

PMID21982866
PMCPMC3219224
OpenAlexW2070087947

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.