Evidence map›Paper›PMID 21980302›Full record

ArticlePLoS genetics2011

A conserved PHD finger protein and endogenous RNAi modulate insulin signaling in Caenorhabditis elegans.

Andres R Mansisidor, Germano Cecere, Sebastian Hoersch, Morten B Jensen, Trupti Kawli, Lisa M Kennedy, Violeta Chavez, Man-Wah Tan, Jason D Lieb, Alla Grishok

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 citations in OpenAlex.

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  5. Cells · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Andres R MansisidorDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America.
Germano Cecere
Sebastian Hoersch
Morten B Jensen
Trupti Kawli
Lisa M Kennedy
Violeta Chavez
Man-Wah Tan
Jason D Lieb
Alla Grishok
Columbia University · USStanford University · USUniversity of North Carolina at Chapel Hill · USMax Delbrück Center · DE

Funding

Identification of DNA Elements Governing Chromatin Function in C elegansU01HG004270 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIEB, JASON D · 2007 to 2011
$9.7M
PREDOCTORAL TRAINING GRANT IN HUMAN GENETICS &DEVELOPMET32GM007088 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SHEN, MICHAEL M. · 1985 to 2020
$7.1M
Investigating the Potential of Endogenous RNAi in Mediating Adaptation to EnvironDP2OD006412 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GRISHOK, ALLA · 2009 to 2009
$2.4M
Genome-wide Dissection of c. elegans Innate ImmunityR01GM066269 · NIGMS · STANFORD UNIVERSITY · PI TAN, MAN-WAH · 2002 to 2006
$1.7M
NHGRI NIH HHS U01 HG004270NIGMS NIH HHS 5T32 GM07088-34NIGMS NIH HHS GM66269NIGMS NIH HHS R01 GM066269NIGMS NIH HHS T32 GM007088NIH HHS 1 DP2 OD006412-01NIH HHS DP2 OD006412
6 · The paper itself

Abstract

Insulin signaling has a profound effect on longevity and the oxidative stress resistance of animals. Inhibition of insulin signaling results in the activation of DAF-16/FOXO and SKN-1/Nrf transcription factors and increased animal fitness. By studying the biological functions of the endogenous RNA interference factor RDE-4 and conserved PHD zinc finger protein ZFP-1 (AF10), which regulate overlapping sets of genes in Caenorhabditis elegans, we identified an important role for these factors in the negative modulation of transcription of the insulin/PI3 signaling-dependent kinase PDK-1. Consistently, increased expression of pdk-1 in zfp-1 and rde-4 mutants contributed to their reduced lifespan and sensitivity to oxidative stress and pathogens due to the reduction in the expression of DAF-16 and SKN-1 targets. We found that the function of ZFP-1 in modulating pdk-1 transcription was important for the extended lifespan of the age-1(hx546) reduction-of-function PI3 kinase mutant, since the lifespan of the age-1; zfp-1 double mutant strain was significantly shorter compared to age-1(hx546). We further demonstrate that overexpression of ZFP-1 caused an increased resistance to oxidative stress in a DAF-16-dependent manner. Our findings suggest that epigenetic regulation of key upstream signaling components in signal transduction pathways through chromatin and RNAi may have a large impact on the outcome of signaling and expression of numerous downstream genes.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEpigenesis, GeneticForkhead Transcription FactorsGene Expression RegulationInsulinLongevityOxidative StressParaquatPhosphatidylinositol 3-KinasesRNA-Binding ProteinsRNA InterferenceSignal TransductionTranscription FactorsCaenorhabditis elegans Proteinsdaf-16 protein, C elegansForkhead Transcription FactorsInsulinParaquatPhosphatidylinositol 3-KinasesRDE-4 protein, C elegansRNA-Binding ProteinsTranscription FactorsY95B8A.8 protein, C elegansZfp-1 protein, C elegans

Identifiers

PMID21980302
PMCPMC3183084
OpenAlexW1498601754

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.