Evidence map›Paper›PMID 21978826›Full record

ArticleBiochimica et biophysica acta2012

The mitotic Clb cyclins are required to alleviate HIR-mediated repression of the yeast histone genes at the G1/S transition.

Amit Dipak Amin, Dessislava K Dimova, Monica E Ferreira, Nidhi Vishnoi, Leandria C Hancock, Mary Ann Osley, Philippe Prochasson

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regulation of histone gene transcription in yeast.Cellular and molecular life sciences : CMLS · 2014
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Amit Dipak AminDepartment of Pathology and Laboratory Medicine, University of Kansas Medical School, Kansas City, KS, USA.
Dessislava K Dimova
Monica E Ferreira
Nidhi Vishnoi
Leandria C Hancock
Mary Ann Osley
Philippe Prochasson
University of Kansas · USRutgers, The State University of New Jersey · USUniversity of New Mexico · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
Genetic Analysis of H2B Ubiquitylation in YeastR01GM040118 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI OSLEY, MARY ANN · 1988 to 2015
$4.7M
NCRR NIH HHS P20 RR016475NIGMS NIH HHS GM40118NIGMS NIH HHS R01 GM040118
6 · The paper itself

Abstract

The histone genes are an important group of cell cycle regulated genes whose transcription is activated during the G1/S transition and repressed in early G1, late S, and G2/M. The HIR complex, comprised of Hir1, Hir2, Hir3 and Hpc2, regulates three of the four histone gene loci. While relief of repression at the G1/S boundary involves the HIR complex, as well as other cofactors, the mechanism by which this derepression occurs remains unknown. To better understand how transcriptional repression contributes to periodic expression in the cell cycle, we sought to identify the cell cycle signals required to alleviate HIR-mediated repression of the histone genes. By measuring histone gene transcription in strains with various combinations of clb mutations, we found that the mitotic Clb1/Clb2 cyclins are required to alleviate Hir-mediated repression during the G1/S transition and that Clb2 physically interacts with the HIR complex. While the HIR complex regulates histone gene transcription in combination with two other histone H3/H4 chaperones, Asf1 and Rtt106, our data demonstrate that the mitotic Clb cyclins are necessary to specifically alleviate the repressive action of the HIR complex itself in order to allow proper expression of the histone genes in late G1/early S phase.

Indexed as

Cell Cycle ProteinsCyclin BCyclinsDNA-Binding ProteinsF-Box ProteinsG1 Phase Cell Cycle CheckpointsGene Expression Regulation, FungalHistonesMitosisMolecular ChaperonesMultiprotein ComplexesMutationNuclear ProteinsPromoter Regions, GeneticRepressor ProteinsSaccharomyces cerevisiaeASF1 protein, S cerevisiaeCDC4 protein, S cerevisiaeCell Cycle ProteinsCLB1 protein, S cerevisiaeCLB2 protein, S cerevisiaeCyclin BCyclinsDNA-Binding ProteinsF-Box ProteinsHIR1 protein, S cerevisiaeHIR2 protein, S cerevisiaeHistonesMolecular ChaperonesMultiprotein ComplexesNuclear ProteinsRepressor ProteinsRtt106 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsUbiquitin-Protein Ligases

Identifiers

PMID21978826
PMCPMC3249481
OpenAlexW2028149886

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.