Evidence map›Paper›PMID 21978595›Full record

ReviewBiochimica et biophysica acta2012

Voltage-dependent conformational changes in connexin channels.

Thaddeus A Bargiello, Qingxiu Tang, Seunghoon Oh, Taekyung Kwon

Abstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  18. ATP Release Channels.International journal of molecular sciences · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Thaddeus A BargielloDominic P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY, USA. ted.bargiello@einstein.yu.edu
Qingxiu Tang
Seunghoon Oh
Taekyung Kwon

Funding

STRUCTURE/FUNCTION STUDIES OF GAP JUNCTIONSR01GM046889 · NIGMS · YESHIVA UNIVERSITY · PI BARGIELLO, THADDEUS ANDREW · 1992 to 2009
$3.8M
NIGMS NIH HHS R01 GM046889NIGMS NIH HHS R01GM46889
6 · The paper itself

Abstract

Channels formed by connexins display two distinct types of voltage-dependent gating, termed V(j)- or fast-gating and loop- or slow-gating. Recent studies, using metal bridge formation and chemical cross-linking have identified a region within the channel pore that contributes to the formation of the loop-gate permeability barrier. The conformational changes are remarkably large, reducing the channel pore diameter from 15 to 20Å to less than 4Å. Surprisingly, the largest conformational change occurs in the most stable region of the channel pore, the 3(10) or parahelix formed by amino acids in the 42-51 segment. The data provide a set of positional constraints that can be used to model the structure of the loop-gate closed state. Less is known about the conformation of the V(j)-gate closed state. There appear to be two different mechanisms; one in which conformational changes in channel structure are linked to a voltage sensor contained in the N-terminus of Cx26 and Cx32 and a second in which the C-terminus of Cx43 and Cx40 may act either as a gating particle to block the channel pore or alternatively to stabilize the closed state. The later mechanism utilizes the same domains as implicated in effecting pH gating of Cx43 channels. It is unclear if the two V(j)-gating mechanisms are related or if they represent different gating mechanisms that operate separately in different subsets of connexin channels. A model of the V(j)-closed state of Cx26 hemichannel that is based on the X-ray structure of Cx26 and electron crystallographic structures of a Cx26 mutation suggests that the permeability barrier for V(j)-gating is formed exclusively by the N-terminus, but recent information suggests that this conformation may not represent a voltage-closed state. Closed state models are considered from a thermodynamic perspective based on information from the 3.5Å Cx26 crystal structure and molecular dynamics (MD) simulations. The applications of computational and experimental methods to define the path of allosteric molecular transitions that link the open and closed states are discussed. This article is part of a Special Issue entitled: The Communicating junctions, composition, structure and characteristics.

Indexed as

Allosteric SiteAnimalsBiophysicsCadmiumConnexin 26Connexin 43ConnexinsCrystallography, X-RayElectrophysiologyGap Junction alpha-5 ProteinGap Junction beta-1 ProteinHumansHydrogen-Ion ConcentrationKineticsMetalsModels, MolecularCadmiumConnexin 26Connexin 43ConnexinsGap Junction alpha-5 ProteinGap Junction beta-1 ProteinGJB2 protein, humanGJB2 protein, XenopusMetals

Identifiers

PMID21978595
PMCPMC3367129

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.