Evidence map›Paper›PMID 21976963›Full record

ArticleMolecular vision2011

VSX2 mutations in autosomal recessive microphthalmia.

Linda M Reis, Ayesha Khan, Ariana Kariminejad, Farhad Ebadi, Rebecca C Tyler, Elena V Semina

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. A framework to identify functional interactors that contribute to disrupted early retinal development in Vsx2 ocular retardation J mice.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
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  8. Selection signature analysis revealsArchives animal breeding · 2023
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  9. Review
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  11. Sostdc1 is expressed in all major compartments of developing and adult mammalian eyes.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2019
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Conserved genetic pathways associated with microphthalmia, anophthalmia, and coloboma.Birth defects research. Part C, Embryo today : reviews · 2015
    Review
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Linda M ReisDepartment of Pediatrics and Children’s Research Institute at the Medical College of Wisconsin, Children’s Hospital of Wisconsin, Milwaukee, WI, USA.
Ayesha Khan
Ariana Kariminejad
Farhad Ebadi
Rebecca C Tyler
Elena V Semina
Medical College of Wisconsin · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR031973 · NCRR · MEDICAL COLLEGE OF WISCONSIN · PI SHAKER, REZA NONE · 2010 to 2011
$7.9M
Identification of new mechanisms for human congenital disordersR21DC010912 · NIDCD · MEDICAL COLLEGE OF WISCONSIN · PI SEMINA, ELENA V · 2010 to 2011
$407k
NCRR NIH HHS 1UL1RR031973NCRR NIH HHS UL1 RR031973NIDCD NIH HHS R21 DC010912
6 · The paper itself

Abstract

purposeTo further explore the spectrum of mutations in the Visual System Homeobox 2 (VSX2/CHX10) gene previously found to be associated with autosomal recessive microphthalmia.

methodsWe screened 95 probands with syndromic or isolated developmental ocular conditions (including 55 with anophthalmia/microphthalmia) for mutations in VSX2.

resultsHomozygous mutations in VSX2 were identified in two out of five consanguineous families with isolated microphthalmia. A novel missense mutation, c.668G>C (p.G223A), was identified in a large Pakistani family with multiple sibships affected with bilateral microphthalmia. This p.G223A mutation affects the conserved CVC motif that was shown to be important for DNA binding and repression activities of VSX2. The second mutation, c.249delG (p.Leu84SerfsX57), was identified in an Iranian family with microphthalmia; this mutation has been previously reported and is predicted to generate a severely truncated mutant protein completely lacking the VSX2 homeodomain, CVC domain and COOH-terminal regions.

conclusionsMutations in VSX2 represent an important cause of autosomal recessive microphthalmia in consanguineous pedigrees. Identification of a second missense mutation in the CVC motif emphasizes the importance of this region for normal VSX2 function.

Indexed as

MutationAmino Acid SequenceAnimalsAnophthalmosAsian PeopleBase SequenceCase-Control StudiesChildConsanguinityConserved SequenceDNA Mutational AnalysisFemaleGenes, RecessiveHomeodomain ProteinsHomozygoteHumansHomeodomain ProteinsTranscription FactorsVSX2 protein, human

Identifiers

PMID21976963
PMCPMC3185030
OpenAlexW2148811856

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.