Evidence map›Paper›PMID 21976662›Full record

ArticleThe Journal of biological chemistry2011

Effects of extracellular DNA on plasminogen activation and fibrinolysis.

Andrey A Komissarov, Galina Florova, Steven Idell

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 70 citations in OpenAlex.

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  12. Sepsis: network pathophysiology and implications for early diagnosis.American journal of physiology. Regulatory, integrative and comparative physiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrey A KomissarovTexas Lung Injury Institute, University of Texas Health Science Center at Tyler, Tyler, Texas 75708-3154. Electronic address: andrey.komissarov@uthct.edu.
Galina FlorovaTexas Lung Injury Institute, University of Texas Health Science Center at Tyler, Tyler, Texas 75708-3154.
Steven IdellTexas Lung Injury Institute, University of Texas Health Science Center at Tyler, Tyler, Texas 75708-3154.
The University of Texas Health Science Center at Tyler · US

Funding

PAI-1 Targeted Intrapleural Fibronolytic TherapyP50HL107186 · NHLBI · UNIVERSITY OF TEXAS HLTH CTR AT TYLER · PI IDELL, STEVEN, KOMISSAROV, ANDREY · 2011 to 2012
$868k
NHLBI NIH HHS P50 HL107186NHLBI NIH HHS P50 HL107186-02PHS HHS P0-1076406
6 · The paper itself

Abstract

The increased levels of extracellular DNA found in a number of disorders involving dysregulation of the fibrinolytic system may affect interactions between fibrinolytic enzymes and inhibitors. Double-stranded (ds) DNA and oligonucleotides bind tissue-(tPA) and urokinase (uPA)-type plasminogen activators, plasmin, and plasminogen with submicromolar affinity. The binding of enzymes to DNA was detected by EMSA, steady-state, and stopped-flow fluorimetry. The interaction of dsDNA/oligonucleotides with tPA and uPA includes a fast bimolecular step, followed by two monomolecular steps, likely indicating slow conformational changes in the enzyme. DNA (0.1-5.0 μg/ml), but not RNA, potentiates the activation of Glu- and Lys-plasminogen by tPA and uPA by 480- and 70-fold and 10.7- and 17-fold, respectively, via a template mechanism similar to that known for fibrin. However, unlike fibrin, dsDNA/oligonucleotides moderately affect the reaction between plasmin and α(2)-antiplasmin and accelerate the inactivation of tPA and two chain uPA by plasminogen activator inhibitor-1 (PAI-1), which is potentiated by vitronectin. dsDNA (0.1-1.0 μg/ml) does not affect the rate of fibrinolysis by plasmin but increases by 4-5-fold the rate of fibrinolysis by Glu-plasminogen/plasminogen activator. The presence of α(2)-antiplasmin abolishes the potentiation of fibrinolysis by dsDNA. At higher concentrations (1.0-20 μg/ml), dsDNA competes for plasmin with fibrin and decreases the rate of fibrinolysis. dsDNA/oligonucleotides incorporated into a fibrin film also inhibit fibrinolysis. Thus, extracellular DNA at physiological concentrations may potentiate fibrinolysis by stimulating fibrin-independent plasminogen activation. Conversely, DNA could inhibit fibrinolysis by increasing the susceptibility of fibrinolytic enzymes to serpins.

Indexed as

FibrinolysisAnimalsDNAHumansKineticsMacromolecular SubstancesModels, ChemicalNucleic AcidsOligonucleotidesPlasminogenPlasminogen ActivatorsRecombinant ProteinsSalmonSerpinsTime FactorsTissue Plasminogen ActivatorDNAMacromolecular SubstancesNucleic AcidsOligonucleotidesPlasminogenPlasminogen ActivatorsRecombinant ProteinsSerpinsTissue Plasminogen ActivatorUrokinase-Type Plasminogen Activator

Identifiers

PMID21976662
PMCPMC3234961
OpenAlexW2031259785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.