ArticleThe ISME journal2012
Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation.
Article in The ISME journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Advances in environmental DNA monitoring: standardization, automation, and emerging technologies in aquatic ecosystems.Science China. Life sciences · 2024Review
- Role of Bacterial Community Composition as a Driver of the Small-Sized Phytoplankton Community Structure in a Productive Coastal System.Microbial ecology · 2023Article
- Spatio-temporal patterns of Synechococcus oligotypes in Moroccan lagoonal environments.Scientific reports · 2023Article
- Spatio-Temporal Variation ofFrontiers in microbiology · 2022Article
- Physical mixing in coastal waters controls and decouples nitrification via biomass dilution.Proceedings of the National Academy of Sciences of the United States of America · 2021Article
- Marine archaeal dynamics and interactions with the microbial community over 5 years from surface to seafloor.The ISME journal · 2017Article
- Seasonal Succession and Spatial Patterns ofFrontiers in microbiology · 2017Article
- Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.The ISME journal · 2015Article
- Marine microbial community dynamics and their ecological interpretation.Nature reviews. Microbiology · 2015Review
- Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor.Frontiers in microbiology · 2015Article
- Slow science: the value of long ocean biogeochemistry records.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2014Article
- Differential contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal surface waters.The ISME journal · 2014Article
- Ecogenomic sensor reveals controls on N2-fixing microorganisms in the North Pacific Ocean.The ISME journal · 2014Article
- Seasonal variation in the metatranscriptomes of a Thaumarchaeota population from SE USA coastal waters.The ISME journal · 2014Article
- Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight.The ISME journal · 2013Article
- Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters.Proceedings of the National Academy of Sciences of the United States of America · 2013Article
Corrections and comments
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Monterey Bay, CA is an Eastern boundary upwelling system that is nitrogen limited much of the year. In order to resolve population dynamics of microorganisms important for nutrient cycling in this region, we deployed the Environmental Sample Processor with quantitative PCR assays targeting both ribosomal RNA genes and functional genes for subclades of cyanobacteria (Synechococcus) and ammonia-oxidizing Archaea (Thaumarchaeota) populations. Results showed a strong correlation between Thaumarchaea abundances and nitrate during the spring upwelling but not the fall sampling period. In relatively stratified fall waters, the Thaumarchaeota community reached higher numbers than in the spring, and an unexpected positive correlation with chlorophyll concentration was observed. Further, we detected drops in Synechococcus abundance that occurred on short (that is, daily) time scales. Upwelling intensity and blooms of eukaryotic phytoplankton strongly influenced Synechococcus distributions in the spring and fall, revealing what appear to be the environmental limitations of Synechococcus populations in this region. Each of these findings has implications for Monterey Bay biogeochemistry. High-resolution sampling provides a better-resolved framework within which to observe changes in the plankton community. We conclude that controls on these ecosystems change on smaller scales than are routinely assessed, and that more predictable trends will be uncovered if they are evaluated within seasonal (monthly), rather than on annual or interannual scales.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.