Evidence map›Paper›PMID 21970549›Full record

ArticleJournal of proteome research2012

Proteomic profiling of the influence of iron availability on Cryptococcus gattii.

Juliana Crestani, Paulo Costa Carvalho, Xuemei Han, Adriana Seixas, Leonardo Broetto, Juliana de Saldanha da Gama Fischer, Charley Christian Staats, Augusto Schrank, John R Yates, Marilene Henning Vainstein

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Characterization of the Potential ProbioticIranian journal of biotechnology · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Identification of genes expressed by Cryptococcus gattii during iron deprivation.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2014
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Juliana CrestaniCentro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9500, 43421, Caixa Postal 15005, Porto Alegre, RS 91501-970, Brazil.
Paulo Costa Carvalho
Xuemei Han
Adriana Seixas
Leonardo Broetto
Juliana de Saldanha da Gama Fischer
Charley Christian Staats
Augusto Schrank
John R Yates
Marilene Henning Vainstein
Universidade Federal do Rio Grande do Sul · BRScripps Research Institute · USFundação Carlos Chagas · BRFundação Oswaldo Cruz · BR

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
NCRR NIH HHS P41 RR011823NCRR NIH HHS P41-RR011823NIGMS NIH HHS P41 GM103533
6 · The paper itself

Abstract

Iron is essential and ubiquitous in living organisms. The competition for this micronutrient between the host and its pathogens has been related to disease establishment. Cryptococcus gattii is an encapsulated yeast that causes cryptococcosis mainly in immunocompetent individuals. In this study, we analyzed the proteomic profile of the C. gattii R265 Vancouver Island isolate under iron-depleted and -repleted conditions by multidimensional protein identification technology (MudPIT) and by 2D-GE. Proteins and key mechanisms affected by alteration of iron levels such as capsule production, cAMP-signaling pathway, response to stress, and metabolic pathways related to mitochondrial function were identified. Our results also show both proteomic methodologies employed to be complementary.

Indexed as

Biosynthetic PathwaysCryptococcus gattiiElectrophoresis, Gel, Two-DimensionalFungal ProteinsGene ExpressionGene Expression Regulation, FungalIronMolecular Sequence AnnotationProteomeProteomicsFungal ProteinsIronProteome

Identifiers

PMID21970549
PMCPMC3253262
OpenAlexW2013576761

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.