Evidence map›Paper›PMID 21966429›Full record

ArticlePloS one2011

Unexpected diversity and photoperiod dependence of the zebrafish melanopsin system.

Vanessa Matos-Cruz, Joseph Blasic, Benjamin Nickle, Phyllis R Robinson, Samer Hattar, Marnie E Halpern

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 93 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Vanessa Matos-CruzDepartment of Embryology, Carnegie Institution for Science, Baltimore, Maryland, United States of America.
Joseph Blasic
Benjamin Nickle
Phyllis R Robinson
Samer Hattar
Marnie E Halpern
Johns Hopkins University · USUniversity of Maryland, Baltimore County · US

Funding

Molecular characterization of mouse melanopsin and second messenger pathway.R01EY019053 · NEI · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI ROBINSON, PHYLLIS R · 2009 to 2012
$1.2M
Characterization of diverse melanopsin-expressing cells in zebrafishF31EY019843 · NEI · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI MATOSCRUZ, VANESSA · 2009 to 2011
$95k
NEI NIH HHS F31 EY019843NEI NIH HHS F31EY019843NEI NIH HHS R01 EY019053NEI NIH HHS R01EY019053
6 · The paper itself

Abstract

Animals have evolved specialized photoreceptors in the retina and in extraocular tissues that allow them to measure light changes in their environment. In mammals, the retina is the only structure that detects light and relays this information to the brain. The classical photoreceptors, rods and cones, are responsible for vision through activation of rhodopsin and cone opsins. Melanopsin, another photopigment first discovered in Xenopus melanophores (Opn4x), is expressed in a small subset of retinal ganglion cells (RGCs) in the mammalian retina, where it mediates non-image forming functions such as circadian photoentrainment and sleep. While mammals have a single melanopsin gene (opn4), zebrafish show remarkable diversity with two opn4x-related and three opn4-related genes expressed in distinct patterns in multiple neuronal cell types of the developing retina, including bipolar interneurons. The intronless opn4.1 gene is transcribed in photoreceptors as well as in horizontal cells and produces functional photopigment. Four genes are also expressed in the zebrafish embryonic brain, but not in the photoreceptive pineal gland. We discovered that photoperiod length influences expression of two of the opn4-related genes in retinal layers involved in signaling light information to RGCs. Moreover, both genes are expressed in a robust diurnal rhythm but with different phases in relation to the light-dark cycle. The results suggest that melanopsin has an expanded role in modulating the retinal circuitry of fish.

Indexed as

PhotoperiodAnimalsGene Expression RegulationLarvaMelanopsinPhylogenyPineal GlandRetinaRetinal Ganglion CellsRod OpsinsZebrafishZebrafish ProteinsMelanopsinRod OpsinsZebrafish Proteins

Identifiers

PMID21966429
PMCPMC3178608
OpenAlexW2054617306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.