Evidence map›Paper›PMID 21966289›Full record

ArticleInternational journal of biomedical imaging2012

Landmark optimization using local curvature for point-based nonlinear rodent brain image registration.

Yutong Liu, Balasrinivasa R Sajja, Mariano G Uberti, Howard E Gendelman, Tammy Kielian, Michael D Boska

Abstract read
In one paragraph

Article in International journal of biomedical imaging, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Bayesian Landmark-based Shape Analysis of Tumor Pathology Images.Journal of the American Statistical Association · 2024
    Article
  2. Article
  3. Article
  4. Optimal setting of image bounding box can improve registration accuracy of diffusion tensor tractography.International journal of computer assisted radiology and surgery · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yutong LiuDepartment of Radiology, University of Nebraska Medical Center, 981045 Nebraska Medical Center, Omaha, NE 68198, USA.
Balasrinivasa R Sajja
Mariano G Uberti
Howard E Gendelman
Tammy Kielian
Michael D Boska

Funding

Therapeutics Core (Page 286)P30MH062261 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FOX, HOWARD S · 2000 to 2021
$37.7M
Pharmacokinetics and Drug-Drug InteractionsP01DA028555 · NIDA · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FOX, HOWARD S · 2010 to 2019
$16.8M
Proteomics CoreP01NS043985 · NINDS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CIBOROWSKI, PAWEL S · 2003 to 2012
$11.8M
TARGETED NANOCARRIER FOR SIRNA DELIVERY TO TUMOR VASCULATUREP20RR021937 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI KABANOV, ALEXANDER V · 2008 to 2011
$8.6M
THE PATHOGENESIS OF BRAIN ABSCESSR01NS040730 · NINDS · UNIV OF ARKANSAS FOR MED SCIS · PI KIELIAN, TAMMY L · 2001 to 2013
$3.4M
Manganese Enhanced Multi-MRI for Murine HIV-1 Associated Neurocognitive DisordersK25MH089851 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI LIU, YUTONG · 2010 to 2014
$723k
NCRR NIH HHS P20 RR021937NIDA NIH HHS P01 DA028555NIMH NIH HHS K25 MH089851NIMH NIH HHS P30 MH062261NINDS NIH HHS P01 NS043985NINDS NIH HHS R01 NS040730
6 · The paper itself

Abstract

Purpose. To develop a technique to automate landmark selection for point-based interpolating transformations for nonlinear medical image registration. Materials and Methods. Interpolating transformations were calculated from homologous point landmarks on the source (image to be transformed) and target (reference image). Point landmarks are placed at regular intervals on contours of anatomical features, and their positions are optimized along the contour surface by a function composed of curvature similarity and displacements of the homologous landmarks. The method was evaluated in two cases (n = 5 each). In one, MRI was registered to histological sections; in the second, geometric distortions in EPI MRI were corrected. Normalized mutual information and target registration error were calculated to compare the registration accuracy of the automatically and manually generated landmarks. Results. Statistical analyses demonstrated significant improvement (P < 0.05) in registration accuracy by landmark optimization in most data sets and trends towards improvement (P < 0.1) in others as compared to manual landmark selection.

Identifiers

PMID21966289
PMCPMC3180176

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.