Evidence map›Paper›PMID 21962254›Full record

ArticleJournal of the American Chemical Society2011

Iterative in situ click chemistry assembles a branched capture agent and allosteric inhibitor for Akt1.

Steven W Millward, Ryan K Henning, Gabriel A Kwong, Suresh Pitram, Heather D Agnew, Kaycie M Deyle, Arundhati Nag, Jason Hein, Su Seong Lee, Jaehong Lim and 3 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 56 citations in OpenAlex.

  1. Protein Catalyzed Capture (PCC) Agents for Antigen Targeting.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  2. Article
  3. Protein-Catalyzed Capture Agents.Chemical reviews · 2019
    Review
  4. Article
  5. Optimized syntheses of Fmoc azido amino acids for the preparation of azidopeptides.Journal of peptide science : an official publication of the European Peptide Society · 2017
    Article
  6. Article
  7. Degradation of Akt using protein-catalyzed capture agents.Journal of peptide science : an official publication of the European Peptide Society · 2016
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Investigating fluorescent dyes in fluorescence-assisted screenings.Chemical communications (Cambridge, England) · 2014
    Article
  13. Article
  14. Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  15. Article
  16. In situ click chemistry: from small molecule discovery to synthetic antibodies.Integrative biology : quantitative biosciences from nano to macro · 2013
    Review
  17. Article
  18. Selective RNA versus DNA G-quadruplex targeting by in situ click chemistry.Angewandte Chemie (International ed. in English) · 2012
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Steven W MillwardNanosystems Biology Cancer Center, Division of Chemistry and Chemical Engineering, MC-127-72, California Institute of Technology, Pasadena, California 91125, United States.
Ryan K Henning
Gabriel A Kwong
Suresh Pitram
Heather D Agnew
Kaycie M Deyle
Arundhati Nag
Jason Hein
Su Seong Lee
Jaehong Lim
Jessica A Pfeilsticker
K Barry Sharpless
James R Heath
California Institute of Technology · USInstitute of Bioengineering and Nanotechnology · SGScripps Research Institute · USMassachusetts Institute of Technology · US

Funding

QUANTITATIVE IMAGE ANALYSIS SPECIALIZED RESOURCE COREU54CA119347 · NCI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI HOOD, LEROY E · 2005 to 2009
$17.8M
Design of Affinity Capture Agents for Akt1 Using in situ Click ChemistryF32CA136150 · NCI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI MILLWARD, STEVEN W · 2008 to 2010
$149k
NCI NIH HHS 1F32CA136150-01NCI NIH HHS 5U54CA119347NCI NIH HHS F32 CA136150NCI NIH HHS U54 CA119347
6 · The paper itself

Abstract

We describe the use of iterative in situ click chemistry to design an Akt-specific branched peptide triligand that is a drop-in replacement for monoclonal antibodies in multiple biochemical assays. Each peptide module in the branched structure makes unique contributions to affinity and/or specificity resulting in a 200 nM affinity ligand that efficiently immunoprecipitates Akt from cancer cell lysates and labels Akt in fixed cells. Our use of a small molecule to preinhibit Akt prior to screening resulted in low micromolar inhibitory potency and an allosteric mode of inhibition, which is evidenced through a series of competitive enzyme kinetic assays. To demonstrate the efficiency and selectivity of the protein-templated in situ click reaction, we developed a novel QPCR-based methodology that enabled a quantitative assessment of its yield. These results point to the potential for iterative in situ click chemistry to generate potent, synthetically accessible antibody replacements with novel inhibitory properties.

Indexed as

Allosteric SiteClick ChemistryProtein Kinase InhibitorsProto-Oncogene Proteins c-aktStructure-Activity RelationshipProtein Kinase InhibitorsProto-Oncogene Proteins c-akt

Identifiers

PMID21962254
PMCPMC3651860
OpenAlexW1965780953

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.