Evidence map›Paper›PMID 21961045›Full record

ArticlePloS one2011

Analytical performance of the Roche LightCycler® Mycobacterium Detection Kit for the diagnosis of clinically important mycobacterial species.

Shaheed V Omar, Andreas Roth, Nazir A Ismail, Linda Erasmus, Marthie Ehlers, Marleen Kock, Nuraan Paulse, Halima M Said, Anwar A Hoosen, Udo Reischl

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Shaheed V OmarDepartment of Medical Microbiology, University of Pretoria, Pretoria, South Africa. shaheed.vally@gmail.com
Andreas Roth
Nazir A Ismail
Linda Erasmus
Marthie Ehlers
Marleen Kock
Nuraan Paulse
Halima M Said
Anwar A Hoosen
Udo Reischl
University of Pretoria · ZAHelios Klinikum Emil von Behring · DENational Health Laboratory Service · ZANational Institute for Communicable DiseasesUniversity Hospital Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe LightCycler® Mycobacterium Detection Kit based on real-time PCR technology for the detection of Mycobacterium tuberculosis, Mycobacterium avium and Mycobacterium kansasii was recently developed. This study evaluated its analytical sensitivity, specificity and reproducibility. METHODOLOGY/PRINCIPAL

findingsPlasmid standards were prepared and used to determine the limit of detection. The assay was also performed against organisms other than mycobacteria, other mycobacterial strains and interfering substances to exclude cross-reactivity and interference. Reference standards were prepared and tested to assess the assay's reproducibility. All PCR assays were performed using the LightCycler® 2.0 Instrument. The detection limit for M. tuberculosis was 28 copies per microlitre. Neither cross-reactivity nor interference occurred with non-mycobacterial organisms and substances tested. Overall reproducibility for consecutive measurements, run-to-run, lot-to-lot, day-to-day and laboratory-to-laboratory achieved a coefficient of variance of less than two percent. SIGNIFICANCE: The LightCycler® Mycobacterium Detection kit has shown to be a robust and accurate assay with the potential to be used as a rapid TB diagnostic test.

Indexed as

Bacteriological TechniquesClinical Laboratory TechniquesDiagnosis, DifferentialDNA, BacterialHumansMycobacterium aviumMycobacterium InfectionsMycobacterium kansasiiMycobacterium tuberculosisReagent Kits, DiagnosticReal-Time Polymerase Chain ReactionReference StandardsReproducibility of ResultsSensitivity and SpecificitySpecies SpecificityTransition TemperatureDNA, BacterialReagent Kits, Diagnostic

Identifiers

PMID21961045
PMCPMC3178549
OpenAlexW1990140821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.