Evidence map›Paper›PMID 21960445›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Conformational trapping of mismatch recognition complex MSH2/MSH3 on repair-resistant DNA loops.

Walter H Lang, Julie E Coats, Jerzy Majka, Greg L Hura, Yuyen Lin, Ivan Rasnik, Cynthia T McMurray

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 69 citations in OpenAlex.

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  14. DNA Mismatch Repair and its Role in Huntington's Disease.Journal of Huntington's disease · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Walter H LangLawrence Berkeley National Laboratory, Life Sciences Division, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Julie E Coats
Jerzy Majka
Greg L Hura
Yuyen Lin
Ivan Rasnik
Cynthia T McMurray
Lawrence Berkeley National Laboratory · USEmory University · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Chemical FingerprintingR01NS060115 · NINDS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI POLYZOS, ARIS A · 2007 to 2024
$7.7M
TRAFFICKING DEFECTS IN HUNTINGTONS DISEASER01NS040738 · NINDS · MAYO CLINIC ROCHESTER · PI MCMURRAY, CYNTHIA THERESE · 2001 to 2009
$3.4M
Mismatch Repair and DNA expansionR01GM066359 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI MCMURRAY, CYNTHIA THERESE · 2004 to 2011
$2.9M
Age of Onset and Huntingtons DiseaseR01NS062384 · NINDS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI MCMURRAY, CYNTHIA THERESE · 2009 to 2010
$1.3M
NCI NIH HHS CA092584NCI NIH HHS P01 CA092584NIGMS NIH HHS GM066359NIGMS NIH HHS R01 GM066359NINDS NIH HHS NS060115NINDS NIH HHS NS062384NINDS NIH HHS NS40738NINDS NIH HHS R01 NS040738NINDS NIH HHS R01 NS060115NINDS NIH HHS R01 NS062384
6 · The paper itself

Abstract

Insertion and deletion of small heteroduplex loops are common mutations in DNA, but why some loops are prone to mutation and others are efficiently repaired is unknown. Here we report that the mismatch recognition complex, MSH2/MSH3, discriminates between a repair-competent and a repair-resistant loop by sensing the conformational dynamics of their junctions. MSH2/MSH3 binds, bends, and dissociates from repair-competent loops to signal downstream repair. Repair-resistant Cytosine-Adenine-Guanine (CAG) loops adopt a unique DNA junction that traps nucleotide-bound MSH2/MSH3, and inhibits its dissociation from the DNA. We envision that junction dynamics is an active participant and a conformational regulator of repair signaling, and governs whether a loop is removed by MSH2/MSH3 or escapes to become a precursor for mutation.

Indexed as

DNA Mismatch RepairAmino Acid SubstitutionBase Pair MismatchBase SequenceBinding SitesDNADNA-Binding ProteinsFluorescence Resonance Energy TransferHumansIn Vitro TechniquesModels, MolecularMultiprotein ComplexesMutagenesis, Site-DirectedMutS Homolog 2 ProteinMutS Homolog 3 ProteinNucleic Acid ConformationDNADNA-Binding ProteinsMSH2 protein, humanMSH3 protein, humanMultiprotein ComplexesMutS Homolog 2 ProteinMutS Homolog 3 ProteinRecombinant Proteins

Identifiers

PMID21960445
PMCPMC3198364
OpenAlexW1973211150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.