Evidence map›Paper›PMID 21958913›Full record

ArticleMobile DNA2011

Retrotransposition of R2 elements in somatic nuclei during the early development of Drosophila.

Michael T Eickbush, Thomas H Eickbush

Open access · goldAbstract read
In one paragraph

Article in Mobile DNA, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Synaptonemal Complex-DeficientG3 (Bethesda, Md.) · 2020
    Article
  4. The mLife science alliance · 2019
    Article
  5. Article
  6. The Retrotransposon storm and the dangers of a Collyer's genome.Current opinion in genetics & development · 2018
    Review
  7. Review
  8. Somatizing the transposons action.Mobile genetic elements · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Michael T EickbushDepartment of Biology, University of Rochester, Rochester, NY, USA. eick@mail.rochester.edu.
Thomas H Eickbush
University of Rochester · US

Funding

Retrotransposon expression within ribosomal gene lociR01GM042790 · NIGMS · UNIVERSITY OF ROCHESTER · PI EICKBUSH, THOMAS H. · 1992 to 2013
$4.8M
NIGMS NIH HHS R01 GM042790
6 · The paper itself

Abstract

backgroundR2 retrotransposable elements exclusively insert in the 28S rRNA genes of their host. Their RNA transcripts are produced by self-processing from a 28S R2 cotranscript. Because full-length R2 transcripts are found in most tissues of R2-active animals, we tested whether new R2 insertions occurred in somatic tissues even though such events would be an evolutionary dead end.

findingsPCR assays were used to identify somatic R2 insertions in isolated adult tissues and larval imaginal discs of Drosophila simulans. R2 somatic mosaics were detected encompassing cells from individual tissues as well as tissues from multiple body segments. The somatic insertions had 5' junction sequences characteristic of germline insertions suggesting they represented authentic retrotransposition events.

conclusionsBody segments are specified early in Drosophila development, thus the detection of the same somatic insertion in cells from multiple tissues suggested that the R2 retrotransposition events had occurred before the blastoderm stage of Drosophila development. R2 activity at this stage, when embryonic nuclei are rapidly dividing in a common cytoplasm, suggests that some retrotransposition events appearing as germline events may correspond to germline mosaicism.

Identifiers

PMID21958913
PMCPMC3190326
OpenAlexW1978337354

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.