Evidence map›Paper›PMID 21958735›Full record

ArticleBiochimica et biophysica acta2012

Functional characterization of the human translocator protein (18kDa) gene promoter in human breast cancer cell lines.

Amani Batarseh, Keith D Barlow, Daniel B Martinez-Arguelles, Vassilios Papadopoulos

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Cellular sources of TSPO expression in healthy and diseased brain.European journal of nuclear medicine and molecular imaging · 2021
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Microglia in Retinal Degeneration.Frontiers in immunology · 2019
    Review
  10. Article
  11. Article
  12. Article
  13. The 18 kDa translocator protein, microglia and neuroinflammation.Brain pathology (Zurich, Switzerland) · 2014
    Review
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Amani BatarsehThe Research Institute of the McGill University Health Centre and the Department of Medicine, McGill University, Montreal, Quebec, Canada H3G 1A4. amani.batarseh@childrens.harvard.edu
Keith D Barlow
Daniel B Martinez-Arguelles
Vassilios Papadopoulos
Georgetown University · USMcGill University Health Centre · CA

Funding

Role of Benzodiazepine Receptor in Leydig Cell FunctionR01ES007747 · NIEHS · MCGILL UNIVERSITY HEALTH CTR RES INST · PI PAPADOPOULOS, VASSILIOS · 1995 to 2011
$3.5M
NIEHS NIH HHS R01 ES007747NIEHS NIH HHS R01 ES07747
6 · The paper itself

Abstract

The translocator protein (18kDa; TSPO) is a mitochondrial drug- and cholesterol-binding protein that has been implicated in several processes, including steroidogenesis, cell proliferation, and apoptosis. Expression of the human TSPO gene is elevated in several cancers. To understand the molecular mechanisms that regulate TSPO expression in human breast cancer cells, the TSPO promoter was identified, cloned, and functionally characterized in poor-in-TSPO hormone-dependent, non-aggressive MCF-7 cells and rich-in-TSPO hormone-independent, aggressive, and metastatic MDA-MB-231 breast cancer cells. RNA ligase-mediated 5'-rapid amplification of cDNA ends analysis indicated transcription initiated at multiple sites downstream of a GC-rich promoter that lacks functional TATA and CCAAT boxes. Deletion analysis indicated that the region from -121 to +66, which contains five putative regulatory sites known as GC boxes, was sufficient to induce reporter activity up to 24-fold in MCF-7 and nearly 120-fold in MDA-MB-231 cells. Electrophoretic mobility shift and chromatin immunoprecipitation assays indicated that Sp1, Sp3 and Sp4 bind to these GC boxes in vitro and to the endogenous TSPO promoter. Silencing of Sp1, Sp3 and Sp4 gene expression reduced TSPO levels. In addition, TSPO expression was epigenetically regulated at one or more of the identified GC boxes. Disruption of the sequence downstream of the main start site of TSPO differentially regulated TSPO promoter activity in MCF-7 and MDA-MB-231 cells, indicating that essential elements contribute to its differential expression in these cells. Taken together, these experiments constitute the first in-depth functional analysis of the human TSPO gene promoter and its transcriptional regulation.

Indexed as

Gene Expression Regulation, NeoplasticBase SequenceBreast NeoplasmsCell Line, TumorFemaleGene SilencingHumansMolecular Sequence DataNeoplasm InvasivenessNeoplasm MetastasisNeoplasms, Hormone-DependentPromoter Regions, GeneticReceptors, GABARNA, Small InterferingSp1 Transcription FactorSp3 Transcription FactorReceptors, GABARNA, Small InterferingSp1 Transcription FactorSP3 protein, humanSp3 Transcription FactorSP4 protein, humanSp4 Transcription FactorTSPO protein, human

Identifiers

PMID21958735
PMCPMC3249510
OpenAlexW2015228000

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.